Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001980A_C01 KMC001980A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565158.1| expressed protein; protein id: At1g77610.1, sup... 234 7e-61
ref|NP_173605.1| glucose 6 phosphate/phosphate translocator, put... 229 2e-59
ref|NP_172712.1| hypothetical protein; protein id: At1g12500.1 [... 62 5e-09
gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like p... 62 6e-09
ref|NP_196036.1| phosphate/phosphoenolpyruvate translocator - li... 62 6e-09
>ref|NP_565158.1| expressed protein; protein id: At1g77610.1, supported by cDNA:
gi_13430497, supported by cDNA: gi_21281057 [Arabidopsis
thaliana] gi|25354487|pir||F96805 unknown protein
T5M16.20 [imported] - Arabidopsis thaliana
gi|12323396|gb|AAG51677.1|AC010704_21 unknown protein;
76010-78007 [Arabidopsis thaliana]
gi|13430498|gb|AAK25871.1|AF360161_1 unknown protein
[Arabidopsis thaliana] gi|21281058|gb|AAM44935.1|
unknown protein [Arabidopsis thaliana]
Length = 336
Score = 234 bits (596), Expect = 7e-61
Identities = 117/140 (83%), Positives = 123/140 (87%), Gaps = 1/140 (0%)
Frame = -1
Query: 560 LPALLLEGNGVIEWLNTHPYPWLALTIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNL 381
+PALLLEG+G++ W HP PW AL II SSGVLAFCLNFSIFYVIHSTTAVTFNVAGNL
Sbjct: 202 IPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNL 261
Query: 380 KVAVAVLVSWLIFRNPISYLNAVGCGITLVGCTFYGYVRHMLSQQQPIPGTPRTPRTPRT 201
KVAVAV+VSWLIFRNPISY+NAVGCGITLVGCTFYGYVRHMLSQQ TP TPRTPRT
Sbjct: 262 KVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQ-----TPGTPRTPRT 316
Query: 200 PGSKMELLPLV-NDKLENKV 144
P SKMELLPLV NDKLE KV
Sbjct: 317 PRSKMELLPLVNNDKLEGKV 336
>ref|NP_173605.1| glucose 6 phosphate/phosphate translocator, putative; protein id:
At1g21870.1 [Arabidopsis thaliana]
gi|6552731|gb|AAF16530.1|AC013482_4 T26F17.9
[Arabidopsis thaliana] gi|29329825|emb|CAD83089.1|
GONST5 Golgi Nucleotide sugar transporter [Arabidopsis
thaliana]
Length = 341
Score = 229 bits (583), Expect = 2e-59
Identities = 112/139 (80%), Positives = 123/139 (87%)
Frame = -1
Query: 560 LPALLLEGNGVIEWLNTHPYPWLALTIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNL 381
LPA LLE NG+++W HP PW AL I+F+SGVLAFCLNFSIFYVI STTAVTFNVAGNL
Sbjct: 208 LPAFLLERNGILDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNL 267
Query: 380 KVAVAVLVSWLIFRNPISYLNAVGCGITLVGCTFYGYVRHMLSQQQPIPGTPRTPRTPRT 201
KVAVAV VSW+IFRNPIS +NAVGCGITLVGCTFYGYVRHMLSQQQ PGTPRTPRTPR
Sbjct: 268 KVAVAVFVSWMIFRNPISPMNAVGCGITLVGCTFYGYVRHMLSQQQ--PGTPRTPRTPR- 324
Query: 200 PGSKMELLPLVNDKLENKV 144
+KMEL+PLVNDKLE+K+
Sbjct: 325 --NKMELIPLVNDKLESKI 341
>ref|NP_172712.1| hypothetical protein; protein id: At1g12500.1 [Arabidopsis
thaliana] gi|8778643|gb|AAF79651.1|AC025416_25 F5O11.25
[Arabidopsis thaliana]
gi|9502394|gb|AAF88101.1|AC025417_29 T12C24.5
[Arabidopsis thaliana] gi|26449593|dbj|BAC41922.1|
unknown protein [Arabidopsis thaliana]
Length = 361
Score = 62.0 bits (149), Expect = 5e-09
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = -1
Query: 551 LLLEGNGV---IEWLNTHPYPWLALTIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNL 381
L +EGN + IE T P L + ++ + +A+ +N + F V T+A+T V GN
Sbjct: 257 LYIEGNVLRVLIEKARTDP---LIIFLLAGNATVAYLVNLTNFLVTKHTSALTLQVLGNG 313
Query: 380 KVAVAVLVSWLIFRNPISYLNAVGCGITLVGCTFYGYVR 264
K AVA VS LIFRNP++ + G G+T++G Y R
Sbjct: 314 KAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEAR 352
>gb|AAL32553.1| phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana] gi|20259810|gb|AAM13252.1|
phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana]
Length = 309
Score = 61.6 bits (148), Expect = 6e-09
Identities = 32/79 (40%), Positives = 47/79 (58%)
Frame = -1
Query: 509 HPYPWLALTIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPI 330
H Y W+ L + + V+A+ N F V T+A+T V GN K AVAV++S LIF+NP+
Sbjct: 227 HQYMWILLLV---NSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILIFQNPV 283
Query: 329 SYLNAVGCGITLVGCTFYG 273
+ + G IT++G YG
Sbjct: 284 TVMGIGGYSITVLGVVAYG 302
>ref|NP_196036.1| phosphate/phosphoenolpyruvate translocator - like protein; protein
id: At5g04160.1, supported by cDNA: 100777., supported
by cDNA: gi_17064797, supported by cDNA: gi_20259809
[Arabidopsis thaliana] gi|9955571|emb|CAC05498.1|
phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana] gi|21536504|gb|AAM60836.1|
phosphate/phosphoenolpyruvate translocator-like protein
[Arabidopsis thaliana]
Length = 309
Score = 61.6 bits (148), Expect = 6e-09
Identities = 32/79 (40%), Positives = 47/79 (58%)
Frame = -1
Query: 509 HPYPWLALTIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPI 330
H Y W+ L + + V+A+ N F V T+A+T V GN K AVAV++S LIF+NP+
Sbjct: 227 HQYMWILLLV---NSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILIFQNPV 283
Query: 329 SYLNAVGCGITLVGCTFYG 273
+ + G IT++G YG
Sbjct: 284 TVMGIGGYSITVLGVVAYG 302
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 527,695,005
Number of Sequences: 1393205
Number of extensions: 11744515
Number of successful extensions: 40846
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 34886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40594
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
