Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001966A_C01 KMC001966A_c01
(593 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T45962 hypothetical protein F7J8.200 - Arabidopsis thaliana... 171 5e-42
ref|NP_568085.1| putative protein; protein id: At5g01220.1 [Arab... 171 5e-42
gb|AAM18913.1|AF454354_1 sulfolipid synthase [Arabidopsis thalia... 171 5e-42
ref|NP_486305.1| sulfolipid sulfoquinovosyldiacylglycerol biosyn... 67 2e-10
ref|ZP_00071233.1| hypothetical protein [Trichodesmium erythraeu... 65 8e-10
>pir||T45962 hypothetical protein F7J8.200 - Arabidopsis thaliana
gi|6759445|emb|CAB69850.1| putative protein [Arabidopsis
thaliana]
Length = 470
Score = 171 bits (434), Expect = 5e-42
Identities = 78/111 (70%), Positives = 92/111 (82%)
Frame = -3
Query: 591 MSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTPGDLEDCLSKLVPLLQDKELRETMGEAA 412
MSSG+PVV ARAGGIPDIIPEDQ+GK G+L+ PGD+EDC++KL LL D+E RE +G+AA
Sbjct: 357 MSSGLPVVAARAGGIPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTLLHDRETREIIGKAA 416
Query: 411 RLEMEKYDWRAATKKIRNENYNAAIWFWRKKRAQLLRPFQWLAKRVFPSPE 259
R E EKYDWRAAT KIRNE Y+AAIWFWRKK+ +L P WL KR+FP PE
Sbjct: 417 REETEKYDWRAATTKIRNEQYSAAIWFWRKKKVHVLGPINWLIKRLFPVPE 467
>ref|NP_568085.1| putative protein; protein id: At5g01220.1 [Arabidopsis thaliana]
gi|15028317|gb|AAK76635.1| unknown protein [Arabidopsis
thaliana]
Length = 434
Score = 171 bits (434), Expect = 5e-42
Identities = 78/111 (70%), Positives = 92/111 (82%)
Frame = -3
Query: 591 MSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTPGDLEDCLSKLVPLLQDKELRETMGEAA 412
MSSG+PVV ARAGGIPDIIPEDQ+GK G+L+ PGD+EDC++KL LL D+E RE +G+AA
Sbjct: 321 MSSGLPVVAARAGGIPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTLLHDRETREIIGKAA 380
Query: 411 RLEMEKYDWRAATKKIRNENYNAAIWFWRKKRAQLLRPFQWLAKRVFPSPE 259
R E EKYDWRAAT KIRNE Y+AAIWFWRKK+ +L P WL KR+FP PE
Sbjct: 381 REETEKYDWRAATTKIRNEQYSAAIWFWRKKKVHVLGPINWLIKRLFPVPE 431
>gb|AAM18913.1|AF454354_1 sulfolipid synthase [Arabidopsis thaliana]
gi|28973765|gb|AAO64198.1| unknown protein [Arabidopsis
thaliana]
Length = 510
Score = 171 bits (434), Expect = 5e-42
Identities = 78/111 (70%), Positives = 92/111 (82%)
Frame = -3
Query: 591 MSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTPGDLEDCLSKLVPLLQDKELRETMGEAA 412
MSSG+PVV ARAGGIPDIIPEDQ+GK G+L+ PGD+EDC++KL LL D+E RE +G+AA
Sbjct: 397 MSSGLPVVAARAGGIPDIIPEDQEGKTGFLFNPGDVEDCVTKLRTLLHDRETREIIGKAA 456
Query: 411 RLEMEKYDWRAATKKIRNENYNAAIWFWRKKRAQLLRPFQWLAKRVFPSPE 259
R E EKYDWRAAT KIRNE Y+AAIWFWRKK+ +L P WL KR+FP PE
Sbjct: 457 REETEKYDWRAATTKIRNEQYSAAIWFWRKKKVHVLGPINWLIKRLFPVPE 507
>ref|NP_486305.1| sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein
[Nostoc sp. PCC 7120] gi|25286777|pir||AB2089 sulfolipid
sulfoquinovosyldiacylglycerol biosynthesis protein
[imported] - Nostoc sp. (strain PCC 7120)
gi|17131356|dbj|BAB73964.1| sulfolipid
sulfoquinovosyldiacylglycerol biosynthesis protein
[Nostoc sp. PCC 7120]
Length = 378
Score = 66.6 bits (161), Expect = 2e-10
Identities = 33/79 (41%), Positives = 55/79 (68%), Gaps = 1/79 (1%)
Frame = -3
Query: 591 MSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTP-GDLEDCLSKLVPLLQDKELRETMGEA 415
M++G PVV AR+GGIPDI+ DG GYL+ P D++D ++ V LL++ + R+T+ +
Sbjct: 288 MAAGCPVVAARSGGIPDIVT---DGVNGYLFNPKADIQDAINATVRLLENAQERDTIRQN 344
Query: 414 ARLEMEKYDWRAATKKIRN 358
AR E E + W +AT+++++
Sbjct: 345 ARREAEGWGWASATRQLQD 363
>ref|ZP_00071233.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 377
Score = 64.7 bits (156), Expect = 8e-10
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = -3
Query: 591 MSSGIPVVGARAGGIPDIIPEDQDGKIGYLYTPGDLEDCLSKLVPLLQDKELRETMGEAA 412
M++G PVV A +GGIPDI+ +G GYL+ P D + ++ L E RET+ + A
Sbjct: 288 MAAGTPVVAANSGGIPDIVT---NGINGYLFDPDDEKGAITATQKLFAHSEERETLRKNA 344
Query: 411 RLEMEKYDWRAATKKIRN 358
R E E++ W AAT+++RN
Sbjct: 345 RAEAERWGWSAATQQLRN 362
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 558,997,628
Number of Sequences: 1393205
Number of extensions: 12609585
Number of successful extensions: 34270
Number of sequences better than 10.0: 293
Number of HSP's better than 10.0 without gapping: 32850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34151
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
