Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001945A_C01 KMC001945A_c01
(466 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P53393|SUT3_STYHA Low affinity sulphate transporter 3 gi|1085... 162 2e-39
emb|CAA11413.1| sulfate permease [Brassica juncea] 146 1e-34
gb|AAF17693.1|AC009243_20 F28K19.21 [Arabidopsis thaliana] 140 7e-33
pir||S74246 sulfate transport protein - Arabidopsis thaliana gi|... 140 7e-33
ref|NP_565165.1| sulfate transporter, putative; protein id: At1g... 140 7e-33
>sp|P53393|SUT3_STYHA Low affinity sulphate transporter 3 gi|1085993|pir||S51765 sulfate
transport protein 3, low affinity - Stylosanthes hamata
gi|607188|emb|CAA57831.1| low affinity sulphate
transporter [Stylosanthes hamata]
Length = 644
Score = 162 bits (409), Expect = 2e-39
Identities = 81/102 (79%), Positives = 92/102 (89%)
Frame = -1
Query: 466 LSTLIVYLSKADKIGVNILKHVKGGLNPSSVHQLQFHDQNVGQAAKIGLICAIIGLTEAI 287
LSTLIV+LSK DK GVNI+KHV+GGLNPSSVH+LQ + +VGQAAKIGLI AII LTEAI
Sbjct: 282 LSTLIVFLSKGDKHGVNIIKHVQGGLNPSSVHKLQLNGPHVGQAAKIGLISAIIALTEAI 341
Query: 286 AVGRSFASIQGYHLDGNEEMLSMGVTNIAGSLTSCYVATGKF 161
AVGRSFA+I+GYHLDGN+EML+MG NIAGSLTSCYV+TG F
Sbjct: 342 AVGRSFANIKGYHLDGNKEMLAMGCMNIAGSLTSCYVSTGSF 383
>emb|CAA11413.1| sulfate permease [Brassica juncea]
Length = 385
Score = 146 bits (368), Expect = 1e-34
Identities = 71/102 (69%), Positives = 88/102 (85%)
Frame = -1
Query: 466 LSTLIVYLSKADKIGVNILKHVKGGLNPSSVHQLQFHDQNVGQAAKIGLICAIIGLTEAI 287
L+TLIVYL+ ++ GV I+KH+K G N SV+QLQF+ Q++GQ AKIG+ICAII LTEAI
Sbjct: 18 LATLIVYLTNSETRGVKIVKHIKPGFNRPSVNQLQFNGQHLGQVAKIGIICAIIALTEAI 77
Query: 286 AVGRSFASIQGYHLDGNEEMLSMGVTNIAGSLTSCYVATGKF 161
AVGRSFA+I+GY LDGN+EM++MG +NIAGSLTSCYVATG F
Sbjct: 78 AVGRSFATIKGYRLDGNKEMMAMGFSNIAGSLTSCYVATGSF 119
>gb|AAF17693.1|AC009243_20 F28K19.21 [Arabidopsis thaliana]
Length = 711
Score = 140 bits (353), Expect = 7e-33
Identities = 71/102 (69%), Positives = 84/102 (81%)
Frame = -1
Query: 466 LSTLIVYLSKADKIGVNILKHVKGGLNPSSVHQLQFHDQNVGQAAKIGLICAIIGLTEAI 287
L+TLIVYLS A+ GV I+KH+K G N SV+QLQF ++GQ AKIGLI AII LTEAI
Sbjct: 331 LATLIVYLSNAESRGVKIVKHIKPGFNQLSVNQLQFKSPHLGQIAKIGLISAIIALTEAI 390
Query: 286 AVGRSFASIQGYHLDGNEEMLSMGVTNIAGSLTSCYVATGKF 161
AVGRSFA+I+GY LDGN+EM++MG NIAGSL+SCYVATG F
Sbjct: 391 AVGRSFATIKGYRLDGNKEMMAMGFMNIAGSLSSCYVATGSF 432
>pir||S74246 sulfate transport protein - Arabidopsis thaliana
gi|1498120|dbj|BAA12811.1| sulfate transporter
[Arabidopsis thaliana]
Length = 658
Score = 140 bits (353), Expect = 7e-33
Identities = 71/102 (69%), Positives = 84/102 (81%)
Frame = -1
Query: 466 LSTLIVYLSKADKIGVNILKHVKGGLNPSSVHQLQFHDQNVGQAAKIGLICAIIGLTEAI 287
L+TLIVYLS A+ GV I+KH+K G N SV+QLQF ++GQ AKIGLI AII LTEAI
Sbjct: 292 LATLIVYLSNAESRGVKIVKHIKPGFNQLSVNQLQFKSPHLGQIAKIGLISAIIALTEAI 351
Query: 286 AVGRSFASIQGYHLDGNEEMLSMGVTNIAGSLTSCYVATGKF 161
AVGRSFA+I+GY LDGN+EM++MG NIAGSL+SCYVATG F
Sbjct: 352 AVGRSFATIKGYRLDGNKEMMAMGFMNIAGSLSSCYVATGSF 393
>ref|NP_565165.1| sulfate transporter, putative; protein id: At1g77990.1, supported
by cDNA: gi_1498119, supported by cDNA: gi_20466793
[Arabidopsis thaliana] gi|20466794|gb|AAM20714.1|
sulfate transporter, putative [Arabidopsis thaliana]
Length = 658
Score = 140 bits (353), Expect = 7e-33
Identities = 71/102 (69%), Positives = 84/102 (81%)
Frame = -1
Query: 466 LSTLIVYLSKADKIGVNILKHVKGGLNPSSVHQLQFHDQNVGQAAKIGLICAIIGLTEAI 287
L+TLIVYLS A+ GV I+KH+K G N SV+QLQF ++GQ AKIGLI AII LTEAI
Sbjct: 292 LATLIVYLSNAESRGVKIVKHIKPGFNQLSVNQLQFKSPHLGQIAKIGLISAIIALTEAI 351
Query: 286 AVGRSFASIQGYHLDGNEEMLSMGVTNIAGSLTSCYVATGKF 161
AVGRSFA+I+GY LDGN+EM++MG NIAGSL+SCYVATG F
Sbjct: 352 AVGRSFATIKGYRLDGNKEMMAMGFMNIAGSLSSCYVATGSF 393
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 393,272,226
Number of Sequences: 1393205
Number of extensions: 8190118
Number of successful extensions: 25463
Number of sequences better than 10.0: 215
Number of HSP's better than 10.0 without gapping: 21657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25059
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 12291312054
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
