Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001943A_C11 KMC001943A_c11
(1152 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF82790.1|AF275315_1 water-selective transport intrinsic mem... 469 e-131
emb|CAC01618.1| aquaporin [Medicago truncatula] 425 e-118
emb|CAB45653.1| putative tonoplast intrinsic protein [Pisum sati... 424 e-117
pir||T09297 tonoplast intrinsic protein homolog MSMCP1 - alfalfa... 417 e-115
pir||JQ2287 SPCP1 protein - soybean gi|310576|gb|AAA02946.1| nod... 409 e-113
>gb|AAF82790.1|AF275315_1 water-selective transport intrinsic membrane protein 1; LIMP1 [Lotus
japonicus]
Length = 251
Score = 469 bits (1207), Expect = e-131
Identities = 240/240 (100%), Positives = 240/240 (100%)
Frame = -3
Query: 1069 MPIRNIAIGAPQEATHPDTLRSALAEFISTFIFVFAGSGSGIAYNKLTDDGAATPAGLIS 890
MPIRNIAIGAPQEATHPDTLRSALAEFISTFIFVFAGSGSGIAYNKLTDDGAATPAGLIS
Sbjct: 1 MPIRNIAIGAPQEATHPDTLRSALAEFISTFIFVFAGSGSGIAYNKLTDDGAATPAGLIS 60
Query: 889 ASIAHAFALFVAVSISANISGGHVNPAVTFGLFVGGNISFLRGVIYIIAQLLGSIVASLL 710
ASIAHAFALFVAVSISANISGGHVNPAVTFGLFVGGNISFLRGVIYIIAQLLGSIVASLL
Sbjct: 61 ASIAHAFALFVAVSISANISGGHVNPAVTFGLFVGGNISFLRGVIYIIAQLLGSIVASLL 120
Query: 709 LAFVTGLAVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGF 530
LAFVTGLAVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGF
Sbjct: 121 LAFVTGLAVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGF 180
Query: 529 IVGANILLGGAFDGASMNPAVSFGPAVVSWSWSNHWIYWVGPLVGGGIAGLIYEVVFIGS 350
IVGANILLGGAFDGASMNPAVSFGPAVVSWSWSNHWIYWVGPLVGGGIAGLIYEVVFIGS
Sbjct: 181 IVGANILLGGAFDGASMNPAVSFGPAVVSWSWSNHWIYWVGPLVGGGIAGLIYEVVFIGS 240
>emb|CAC01618.1| aquaporin [Medicago truncatula]
Length = 250
Score = 425 bits (1092), Expect = e-118
Identities = 209/240 (87%), Positives = 225/240 (93%)
Frame = -3
Query: 1069 MPIRNIAIGAPQEATHPDTLRSALAEFISTFIFVFAGSGSGIAYNKLTDDGAATPAGLIS 890
MPIRNIA+G PQEATHPDTL++ LAEFISTFIFVFAGSGSGIAYNKLT+DGAATPAGLIS
Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLIS 60
Query: 889 ASIAHAFALFVAVSISANISGGHVNPAVTFGLFVGGNISFLRGVIYIIAQLLGSIVASLL 710
ASIAHAFALFVAVS+ ANISGGHVNPAVTFG FVGGNI+ LRG++YIIAQLLGSIVAS L
Sbjct: 61 ASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASAL 120
Query: 709 LAFVTGLAVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGF 530
L FVT +VPAFGLS GVGVG ALVLEIVMTFGLVYTVYATAVDPKKG++G IAPIAIGF
Sbjct: 121 LVFVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGF 180
Query: 529 IVGANILLGGAFDGASMNPAVSFGPAVVSWSWSNHWIYWVGPLVGGGIAGLIYEVVFIGS 350
IVGANIL+GGAF GASMNPAVSFGPAVVSWSWSNHW+YW GPL+GGGIAGL+YEV+FI S
Sbjct: 181 IVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINS 240
>emb|CAB45653.1| putative tonoplast intrinsic protein [Pisum sativum]
Length = 250
Score = 424 bits (1089), Expect = e-117
Identities = 210/240 (87%), Positives = 225/240 (93%)
Frame = -3
Query: 1069 MPIRNIAIGAPQEATHPDTLRSALAEFISTFIFVFAGSGSGIAYNKLTDDGAATPAGLIS 890
MPIRNIAIG PQEATHPDTL++ LAEFISTFIFVFAGSGSGIAYNKLTD+GAATPAGLIS
Sbjct: 1 MPIRNIAIGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTDNGAATPAGLIS 60
Query: 889 ASIAHAFALFVAVSISANISGGHVNPAVTFGLFVGGNISFLRGVIYIIAQLLGSIVASLL 710
ASIAHAFALFVAVS+ ANISGGHVNPAVTFG FVGGNI+ LRG++YIIAQLLGSIVAS L
Sbjct: 61 ASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASAL 120
Query: 709 LAFVTGLAVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGF 530
L FVT +VPAF LSAGVGVG ALVLEIVMTFGLVYTVYATAVDPKKG++G IAPIAIGF
Sbjct: 121 LVFVTASSVPAFALSAGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGF 180
Query: 529 IVGANILLGGAFDGASMNPAVSFGPAVVSWSWSNHWIYWVGPLVGGGIAGLIYEVVFIGS 350
IVGANIL+GGAF GASMNPAVSFGPAVVSWSW+NHWIYW GPL+GGG+AGLIYEV+FI S
Sbjct: 181 IVGANILVGGAFTGASMNPAVSFGPAVVSWSWANHWIYWAGPLIGGGLAGLIYEVLFINS 240
>pir||T09297 tonoplast intrinsic protein homolog MSMCP1 - alfalfa
gi|2443836|gb|AAC04846.1| tonoplast intrinsic protein
homolog MSMCP1 [Medicago sativa]
Length = 249
Score = 417 bits (1071), Expect = e-115
Identities = 207/240 (86%), Positives = 223/240 (92%)
Frame = -3
Query: 1069 MPIRNIAIGAPQEATHPDTLRSALAEFISTFIFVFAGSGSGIAYNKLTDDGAATPAGLIS 890
MPIRNIA+G PQEATHPDTL++ LAEFISTFIFVFAGSGSGIAYNKLT+DGAATPAGLIS
Sbjct: 1 MPIRNIAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLIS 60
Query: 889 ASIAHAFALFVAVSISANISGGHVNPAVTFGLFVGGNISFLRGVIYIIAQLLGSIVASLL 710
ASIAHAFALFVAVS+ ANISGGHVNPAV FG FVGGNI+ LRG++YIIAQLLGSIV S L
Sbjct: 61 ASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSAL 119
Query: 709 LAFVTGLAVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGF 530
L FVT +VPAFGLS GVGVG ALVLEIVMTFGLVYTVYATAVDPKKG++G IAPIAIGF
Sbjct: 120 LVFVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGF 179
Query: 529 IVGANILLGGAFDGASMNPAVSFGPAVVSWSWSNHWIYWVGPLVGGGIAGLIYEVVFIGS 350
IVGANIL+GGAF GASMNPAVSFGPAVVSWSWSNHW+YW GPL+GGGIAGL+YEV+FI S
Sbjct: 180 IVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINS 239
>pir||JQ2287 SPCP1 protein - soybean gi|310576|gb|AAA02946.1| nodulin-26
Length = 249
Score = 409 bits (1052), Expect = e-113
Identities = 206/238 (86%), Positives = 220/238 (91%)
Frame = -3
Query: 1069 MPIRNIAIGAPQEATHPDTLRSALAEFISTFIFVFAGSGSGIAYNKLTDDGAATPAGLIS 890
MPIRNIAIG P+EATHPDTL++ LAEFIST IFVFAGSGSGIAYNKLTD+GA TPAGLIS
Sbjct: 1 MPIRNIAIGRPEEATHPDTLKAGLAEFISTLIFVFAGSGSGIAYNKLTDNGARTPAGLIS 60
Query: 889 ASIAHAFALFVAVSISANISGGHVNPAVTFGLFVGGNISFLRGVIYIIAQLLGSIVASLL 710
ASIAHAFALFVAVS+ NISGGHVNPAVTFG FVG S RG++Y+IAQLLGSIVASLL
Sbjct: 61 ASIAHAFALFVAVSVGPNISGGHVNPAVTFGAFVGAT-SPSRGIVYVIAQLLGSIVASLL 119
Query: 709 LAFVTGLAVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGF 530
LAFVT VPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKG+LG IAPIAIGF
Sbjct: 120 LAFVTASPVPAFGLSAGVGVGNALVLEIVMTFGLVYTVYATAVDPKKGNLGIIAPIAIGF 179
Query: 529 IVGANILLGGAFDGASMNPAVSFGPAVVSWSWSNHWIYWVGPLVGGGIAGLIYEVVFI 356
IVGANILLGGAF GA+MNPAV+FGPAVVSW+W+NHWIYW GPL+GGGIAGLIYEVVFI
Sbjct: 180 IVGANILLGGAFSGAAMNPAVTFGPAVVSWTWTNHWIYWAGPLIGGGIAGLIYEVVFI 237
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,181,855,446
Number of Sequences: 1393205
Number of extensions: 34680597
Number of successful extensions: 941911
Number of sequences better than 10.0: 23485
Number of HSP's better than 10.0 without gapping: 199362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516152
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 70830964476
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)