Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001867A_C01 KMC001867A_c01
(651 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB09799.1| hypothetical protein [Citrus x paradisi] 207 1e-52
dbj|BAA36759.1| glyoxalase I [Oryza sativa (japonica cultivar-gr... 204 6e-52
dbj|BAB71741.1| glyoxalase I [Oryza sativa (japonica cultivar-gr... 204 6e-52
pir||T14439 hypothetical protein - wild cabbage (fragment) gi|14... 202 2e-51
emb|CAA71754.1| hypothetical protein [Sporobolus stapfianus] 201 7e-51
>emb|CAB09799.1| hypothetical protein [Citrus x paradisi]
Length = 291
Score = 207 bits (527), Expect = 1e-52
Identities = 98/124 (79%), Positives = 112/124 (90%)
Frame = -3
Query: 646 RSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYAQ 467
RSIKFYEKALG+K+++ D+PE KYT+AMLGYAEE +T VLELTYNYGVTEYT+GNAYAQ
Sbjct: 166 RSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ 225
Query: 466 VAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLVDHPDFL 287
VAI TDDVY+SAE+VNL T E GGKITRQPG IPGLNTKI SF+DPDGWKTVLVD+ DFL
Sbjct: 226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL 285
Query: 286 KELE 275
KE++
Sbjct: 286 KEIQ 289
Score = 106 bits (265), Expect = 2e-22
Identities = 51/110 (46%), Positives = 70/110 (63%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
+R+IKFY + G+K+++K D PE+KY+ A LG+ E V+ELTYNYGVT Y G +
Sbjct: 35 DRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFG 94
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGW 320
AI T+DVY+ E + GG +TR+PGP+ G T IA DPDG+
Sbjct: 95 HFAIATEDVYKLVENIRAK----GGNVTREPGPLKGGTTHIAFVKDPDGY 140
>dbj|BAA36759.1| glyoxalase I [Oryza sativa (japonica cultivar-group)]
Length = 291
Score = 204 bits (520), Expect = 6e-52
Identities = 97/125 (77%), Positives = 112/125 (89%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
+RSIKFYEKALG+K+++K D P+ KYTIAMLGYA+E +T V+ELTYNYGVTEYT+GNAYA
Sbjct: 167 DRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYA 226
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLVDHPDF 290
QVAIGT+DVY+SAE V L T E GGKI RQPGP+PGLNTKIASFLDPDGWK VLVD+ DF
Sbjct: 227 QVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADF 286
Query: 289 LKELE 275
LKEL+
Sbjct: 287 LKELQ 291
Score = 100 bits (249), Expect = 2e-20
Identities = 52/115 (45%), Positives = 72/115 (62%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
+R+IK Y + G+K+++K D PE+KYT A LG+ E LELTYNYGV +Y G +
Sbjct: 36 DRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFG 95
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLV 305
AI T+DVY+ AE + + KITR+PGP+ G +T IA DPDG+ L+
Sbjct: 96 HFAIATEDVYKLAEKIKSSC---CCKITREPGPVKGGSTVIAFAQDPDGYMFELI 147
>dbj|BAB71741.1| glyoxalase I [Oryza sativa (japonica cultivar-group)]
Length = 291
Score = 204 bits (520), Expect = 6e-52
Identities = 97/125 (77%), Positives = 112/125 (89%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
+RSIKFYEKALG+K+++K D P+ KYTIAMLGYA+E +T V+ELTYNYGVTEYT+GNAYA
Sbjct: 167 DRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYA 226
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLVDHPDF 290
QVAIGT+DVY+SAE V L T E GGKI RQPGP+PGLNTKIASFLDPDGWK VLVD+ DF
Sbjct: 227 QVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADF 286
Query: 289 LKELE 275
LKEL+
Sbjct: 287 LKELQ 291
Score = 100 bits (249), Expect = 2e-20
Identities = 52/115 (45%), Positives = 72/115 (62%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
+R+IK Y + G+K+++K D PE+KYT A LG+ E LELTYNYGV +Y G +
Sbjct: 36 DRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFG 95
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLV 305
AI T+DVY+ AE + + KITR+PGP+ G +T IA DPDG+ L+
Sbjct: 96 HFAIATEDVYKLAEKIKSSC---CCKITREPGPVKGGSTVIAFAQDPDGYMFELI 147
>pir||T14439 hypothetical protein - wild cabbage (fragment)
gi|1469219|emb|CAA99233.1| protein similar to bacterial
YRN1 and HEAHIO proteins [Brassica oleracea]
Length = 259
Score = 202 bits (515), Expect = 2e-51
Identities = 93/124 (75%), Positives = 113/124 (91%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
+R+IKFYEKALG++++++ +RPE KYTI M+GYAEE+E+IVLELTYNYGVTEYT+GNAYA
Sbjct: 132 DRAIKFYEKALGMRLLRRIERPEYKYTIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYA 191
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLVDHPDF 290
Q+AIGTDDVY+SAE+V +A E GGKITR+ GP+PGL TKI SFLDPDGWKTVLVD+ DF
Sbjct: 192 QIAIGTDDVYKSAEVVKIANQELGGKITREAGPLPGLGTKIVSFLDPDGWKTVLVDNEDF 251
Query: 289 LKEL 278
LKEL
Sbjct: 252 LKEL 255
Score = 102 bits (253), Expect = 6e-21
Identities = 51/115 (44%), Positives = 70/115 (60%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
+R+I+FY + GLKV++K D PE+KY+ A LG+ E V+ELTYNYGV+ Y G +
Sbjct: 2 DRTIQFYTECFGLKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFG 61
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLV 305
AI T DV + E V GG +TR+PGP+ G + IA DPDG+ L+
Sbjct: 62 HFAISTQDVSKMVEAVRAK----GGNVTREPGPVKGGGSVIAFVKDPDGYTFELI 112
>emb|CAA71754.1| hypothetical protein [Sporobolus stapfianus]
Length = 285
Score = 201 bits (511), Expect = 7e-51
Identities = 94/125 (75%), Positives = 112/125 (89%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
ERSIKFYEKALG+++++K D P+ KYTIAMLGY +E +T V+ELTYNYGVTEY++GNAYA
Sbjct: 161 ERSIKFYEKALGMRLLRKKDVPDYKYTIAMLGYDDEDKTTVIELTYNYGVTEYSKGNAYA 220
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLVDHPDF 290
QVAIGT+DVY+SAE V LAT E GGKI +QPGP+PG+NTKIASF+DPDGWK VLVDH DF
Sbjct: 221 QVAIGTNDVYKSAEAVELATKELGGKILKQPGPLPGINTKIASFVDPDGWKVVLVDHADF 280
Query: 289 LKELE 275
LKEL+
Sbjct: 281 LKELK 285
Score = 100 bits (248), Expect = 2e-20
Identities = 52/115 (45%), Positives = 72/115 (62%)
Frame = -3
Query: 649 ERSIKFYEKALGLKVVKKTDRPEQKYTIAMLGYAEEHETIVLELTYNYGVTEYTQGNAYA 470
+R+IK Y + G+K+++K D PE+KYT A LGY E + LELTYNYGV +Y G +
Sbjct: 30 DRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGYGPEDKNFALELTYNYGVDKYDIGEGFG 89
Query: 469 QVAIGTDDVYQSAELVNLATPEFGGKITRQPGPIPGLNTKIASFLDPDGWKTVLV 305
AI T+D+ + AE V + KITR+PGP+ G +T IA DPDG+ L+
Sbjct: 90 HFAIATEDINKIAEAVKSSG---CCKITREPGPVKGGSTVIAFAQDPDGYMFELI 141
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 566,331,005
Number of Sequences: 1393205
Number of extensions: 12695598
Number of successful extensions: 28126
Number of sequences better than 10.0: 140
Number of HSP's better than 10.0 without gapping: 27336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28021
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
