Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001851A_C03 KMC001851A_c03
(1045 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM12036.1| anther-specific protein [Pisum sativum] 169 7e-41
sp|P08688|ALB2_PEA Albumin 2 (PA2) gi|81889|pir||S06248 albumin ... 162 7e-39
pir||S58127 seed albumin - mung bean gi|1000708|emb|CAA50008.1| ... 139 1e-31
ref|NP_523852.2| Matrix metalloproteinase 1 CG4859-PB gi|2162677... 51 3e-05
ref|NP_726473.1| Matrix metalloproteinase 1 CG4859-PA gi|2162677... 51 3e-05
>gb|AAM12036.1| anther-specific protein [Pisum sativum]
Length = 230
Score = 169 bits (428), Expect = 7e-41
Identities = 98/202 (48%), Positives = 122/202 (59%), Gaps = 4/202 (1%)
Frame = -2
Query: 981 TTDDTTLNGPYPISA---ALHVTVRGTPV*ENMAVKCAFGRWIATRPTFSPETMCAYIY* 811
T DD LNGP P+ A +L TV GT V CAF F E A I
Sbjct: 36 TRDDKLLNGPLPLPAGFKSLDGTVFGT-----YGVDCAFDTDNDEAFIFY-ENFTALINY 89
Query: 810 VLHISSDDKILRGPMSIPDMFPCLKGTVFEKRIDAAFRSSVSNEAYIFTGDQYARINYA- 634
H + +DKI+ GP I DMFP KGTVFE IDAAFRS+ E Y+F GD YARI+Y
Sbjct: 90 APH-TYNDKIISGPKKISDMFPFFKGTVFENGIDAAFRSTKEKEVYLFKGDLYARIDYGK 148
Query: 633 SISVSYPKTIKNEWPCLAGTIFESGIEAAFASHITNEAYLFKGEQYARIKFTPGKNEDYL 454
+ V K I +PC GT+FE+G++AAFASH TNEAY FKG+ YA +K +PG +DY+
Sbjct: 149 NYLVQSIKNISTGFPCFTGTVFENGVDAAFASHRTNEAYFFKGDYYALVKISPGGIDDYI 208
Query: 453 MGGVRPILSYWPGLGGLLASKN 388
+GGV+PIL WP L G++ K+
Sbjct: 209 IGGVKPILENWPSLRGIIPQKS 230
Score = 49.3 bits (116), Expect = 1e-04
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Frame = -2
Query: 714 IDAAFRSSVSNEAYIFTGDQYARINYASIS-----VSYPKTIKNEWPCLAGTIFES-GIE 553
I+AAFRSS + E Y+F D+Y ++YA + ++ P + + L GT+F + G++
Sbjct: 7 INAAFRSSFNGERYLFIDDKYVLVDYAPGTRDDKLLNGPLPLPAGFKSLDGTVFGTYGVD 66
Query: 552 AAFASHITNEAYLFKGEQYARIKFTPGKNEDYLMGGVRPILSYWPGLGG 406
AF + +EA++F A I + P D ++ G + I +P G
Sbjct: 67 CAFDTD-NDEAFIFYENFTALINYAPHTYNDKIISGPKKISDMFPFFKG 114
>sp|P08688|ALB2_PEA Albumin 2 (PA2) gi|81889|pir||S06248 albumin 2 - garden pea
gi|169029|gb|AAA02981.1| albumin 2
gi|169033|gb|AAA33641.1| major seed albumin
gi|225836|prf||1314296A albumin
Length = 231
Score = 162 bits (411), Expect(2) = 7e-39
Identities = 95/203 (46%), Positives = 122/203 (59%), Gaps = 5/203 (2%)
Frame = -2
Query: 981 TTDDTTLNGPYPIS---AALHVTVRGTPV*ENMAVKCAFGRWIATRPTFSPETMCAYIY* 811
T++D L GP P+ +L+ TV G+ V C+F F E CA I
Sbjct: 36 TSNDKVLYGPTPVRDGFKSLNQTVFGS-----YGVDCSFDTDNDEAFIFY-EKFCALIDY 89
Query: 810 VLHISSDDKILRGPMSIPDMFPCLKGTVFEKRIDAAFRSSVSNEAYIFTGDQYARINYAS 631
H S+ DKI+ GP I DMFP +GTVFE IDAA+RS+ E Y+F GDQYARI+Y +
Sbjct: 90 APH-SNKDKIILGPKKIADMFPFFEGTVFENGIDAAYRSTRGKEVYLFKGDQYARIDYET 148
Query: 630 ISVSYP--KTIKNEWPCLAGTIFESGIEAAFASHITNEAYLFKGEQYARIKFTPGKNEDY 457
S+ K+I+N +PC TIFESG +AAFASH TNE Y FKG+ YAR+ TPG +D
Sbjct: 149 NSMVNKEIKSIRNGFPCFRNTIFESGTDAAFASHKTNEVYFFKGDYYARVTVTPGATDDQ 208
Query: 456 LMGGVRPILSYWPGLGGLLASKN 388
+M GVR L YWP L G++ +N
Sbjct: 209 IMDGVRKTLDYWPSLRGIIPLEN 231
Score = 56.2 bits (134), Expect = 8e-07
Identities = 37/109 (33%), Positives = 63/109 (56%), Gaps = 6/109 (5%)
Frame = -2
Query: 714 IDAAFRSSVSNEAYIFTGDQYARINYA----SISVSY-PKTIKNEWPCLAGTIFES-GIE 553
I+AAFRSS +NEAY+F D+Y ++YA + V Y P +++ + L T+F S G++
Sbjct: 7 INAAFRSSQNNEAYLFINDKYVLLDYAPGTSNDKVLYGPTPVRDGFKSLNQTVFGSYGVD 66
Query: 552 AAFASHITNEAYLFKGEQYARIKFTPGKNEDYLMGGVRPILSYWPGLGG 406
+F + +EA++F + A I + P N+D ++ G + I +P G
Sbjct: 67 CSFDTD-NDEAFIFYEKFCALIDYAPHSNKDKIILGPKKIADMFPFFEG 114
Score = 21.2 bits (43), Expect(2) = 7e-39
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 1012 QYISLDYAPG 983
+Y+ LDYAPG
Sbjct: 26 KYVLLDYAPG 35
>pir||S58127 seed albumin - mung bean gi|1000708|emb|CAA50008.1| mung bean seed
albumin [Vigna radiata]
Length = 272
Score = 139 bits (349), Expect = 1e-31
Identities = 71/130 (54%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Frame = -2
Query: 798 SSDDKILRGPMSIPDMFPCLKGTVFEKRIDAAFRSSVSNEAYIFTGDQYARINYASIS-V 622
+++DKIL GP +I +MFP L+ TVF ID+AFRS+ E Y+F G++Y RI+Y S V
Sbjct: 94 TTNDKILAGPTTIAEMFPVLRNTVFADSIDSAFRSTKGKEVYLFKGNKYVRIDYDSKQLV 153
Query: 621 SYPKTIKNEWPCLAGTIFESGIEAAFASHITNEAYLFKGEQYARIKFTPGKNEDYLMGGV 442
+ I + +P L GT FESGI+A+FASH EAYLFKG++Y RI FTPGK +D L+G V
Sbjct: 154 GSIRNISDGFPVLNGTGFESGIDASFASHKEPEAYLFKGDKYVRIHFTPGKTDDTLVGDV 213
Query: 441 RPILSYWPGL 412
RPIL WP L
Sbjct: 214 RPILDGWPVL 223
Score = 53.9 bits (128), Expect = 4e-06
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Frame = -2
Query: 714 IDAAFR-SSVSNEAYIFTGDQYARINYASIS-----VSYPKTIKNEWPCLAGTIF-ESGI 556
I+AAFR SS E Y F ++Y R+ Y ++ + I + +P LAGT F E GI
Sbjct: 7 INAAFRFSSRDYEVYFFAKNKYVRLQYTPGKTEDKILTNLRLISSGFPSLAGTPFAEPGI 66
Query: 555 EAAFASHITNEAYLFKGEQYARIKFTPGKNEDYLMGGVRPILSYWPGL 412
++AF + +EAY+F A I + PG D ++ G I +P L
Sbjct: 67 DSAFHTE-ASEAYVFSANNRAYIDYAPGTTNDKILAGPTTIAEMFPVL 113
Score = 40.8 bits (94), Expect = 0.035
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 558 IEAAFA-SHITNEAYLFKGEQYARIKFTPGKNEDYLMGGVRPILSYWPGLGG 406
I AAF S E Y F +Y R+++TPGK ED ++ +R I S +P L G
Sbjct: 7 INAAFRFSSRDYEVYFFAKNKYVRLQYTPGKTEDKILTNLRLISSGFPSLAG 58
>ref|NP_523852.2| Matrix metalloproteinase 1 CG4859-PB gi|21626775|gb|AAM68327.1|
CG4859-PB [Drosophila melanogaster]
Length = 570
Score = 50.8 bits (120), Expect = 3e-05
Identities = 28/78 (35%), Positives = 41/78 (51%)
Frame = -2
Query: 723 EKRIDAAFRSSVSNEAYIFTGDQYARINYASISVSYPKTIKNEWPCLAGTIFESGIEAAF 544
+ ++D F S+ E Y F GD+Y ++ S+ YP+ I WP L G I+AAF
Sbjct: 331 DSKVDTLFNSA-QGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG-----NIDAAF 384
Query: 543 ASHITNEAYLFKGEQYAR 490
++ + Y FKG QY R
Sbjct: 385 -TYKNGKTYFFKGTQYWR 401
Score = 37.0 bits (84), Expect = 0.51
Identities = 36/120 (30%), Positives = 48/120 (40%)
Frame = -2
Query: 771 PMSIPDMFPCLKGTVFEKRIDAAFRSSVSNEAYIFTGDQYARINYASISVSYPKTIKNEW 592
P I +P L G IDAAF + + Y F G QY R + YPK I +
Sbjct: 366 PQLISKGWPGLPGN-----IDAAFTYK-NGKTYFFKGTQYWRYQGRQMDGVYPKEISEGF 419
Query: 591 PCLAGTIFESGIEAAFASHITNEAYLFKGEQYARIKFTPGKNEDYLMGGVRPILSYWPGL 412
T ++AA + Y FKG ++ R F P K +PI S W G+
Sbjct: 420 -----TGIPDHLDAAMVWGGNGKIYFFKGSKFWR--FDPAKRPPVKASYPKPI-SNWEGV 471
>ref|NP_726473.1| Matrix metalloproteinase 1 CG4859-PA gi|21626774|gb|AAF47255.2|
CG4859-PA [Drosophila melanogaster]
Length = 613
Score = 50.8 bits (120), Expect = 3e-05
Identities = 28/78 (35%), Positives = 41/78 (51%)
Frame = -2
Query: 723 EKRIDAAFRSSVSNEAYIFTGDQYARINYASISVSYPKTIKNEWPCLAGTIFESGIEAAF 544
+ ++D F S+ E Y F GD+Y ++ S+ YP+ I WP L G I+AAF
Sbjct: 331 DSKVDTLFNSA-QGETYAFKGDKYYKLTTDSVEEGYPQLISKGWPGLPG-----NIDAAF 384
Query: 543 ASHITNEAYLFKGEQYAR 490
++ + Y FKG QY R
Sbjct: 385 -TYKNGKTYFFKGTQYWR 401
Score = 37.0 bits (84), Expect = 0.51
Identities = 36/120 (30%), Positives = 48/120 (40%)
Frame = -2
Query: 771 PMSIPDMFPCLKGTVFEKRIDAAFRSSVSNEAYIFTGDQYARINYASISVSYPKTIKNEW 592
P I +P L G IDAAF + + Y F G QY R + YPK I +
Sbjct: 366 PQLISKGWPGLPGN-----IDAAFTYK-NGKTYFFKGTQYWRYQGRQMDGVYPKEISEGF 419
Query: 591 PCLAGTIFESGIEAAFASHITNEAYLFKGEQYARIKFTPGKNEDYLMGGVRPILSYWPGL 412
T ++AA + Y FKG ++ R F P K +PI S W G+
Sbjct: 420 -----TGIPDHLDAAMVWGGNGKIYFFKGSKFWR--FDPAKRPPVKASYPKPI-SNWEGV 471
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 930,771,365
Number of Sequences: 1393205
Number of extensions: 21002303
Number of successful extensions: 47296
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 45069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47238
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 61532797421
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
