Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001826A_C01 KMC001826A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA13114.1| polyketide reductase (GGPKR2) [Glycyrrhiza glabra] 231 5e-60
dbj|BAA13113.1| polyketide reductase (GGPKR1) [Glycyrrhiza glabra] 231 5e-60
pir||S48850 chalcone reductase (EC 1.-.-.-) - alfalfa gi|563538|... 230 9e-60
gb|AAB41556.1| chalcone reductase gi|1096530|prf||2111449B chalc... 230 9e-60
pir||S48851 chalcone reductase (EC 1.-.-.-) - alfalfa gi|563540|... 229 1e-59
>dbj|BAA13114.1| polyketide reductase (GGPKR2) [Glycyrrhiza glabra]
Length = 315
Score = 231 bits (588), Expect = 5e-60
Identities = 111/122 (90%), Positives = 116/122 (94%)
Frame = -2
Query: 533 MNLAWQQKELREFCNANGIVLTAFSPLRKGGSRGPNEVMENDMLKEIAEAHGKTIAQVSL 354
MNLAWQQK+LREFCNANGIVLTAFSPLRKG SRGPNEVMENDMLK IAEAHGK+IAQVSL
Sbjct: 192 MNLAWQQKKLREFCNANGIVLTAFSPLRKGASRGPNEVMENDMLKGIAEAHGKSIAQVSL 251
Query: 353 RWLYEQGVTFAAKSYDKDRMNQNLQIFDWALTKEDLEKIDQIKQNRLIPGPTKPQLNDLY 174
RWLYEQGVTF AKSYDK+RMNQNLQIFDW LT ED +KIDQIKQNRLIPGPTKPQLNDL+
Sbjct: 252 RWLYEQGVTFVAKSYDKERMNQNLQIFDWELTTEDHQKIDQIKQNRLIPGPTKPQLNDLW 311
Query: 173 DD 168
DD
Sbjct: 312 DD 313
>dbj|BAA13113.1| polyketide reductase (GGPKR1) [Glycyrrhiza glabra]
Length = 316
Score = 231 bits (588), Expect = 5e-60
Identities = 111/122 (90%), Positives = 116/122 (94%)
Frame = -2
Query: 533 MNLAWQQKELREFCNANGIVLTAFSPLRKGGSRGPNEVMENDMLKEIAEAHGKTIAQVSL 354
MNLAWQQK+LREFCNANGIVLTAFSPLRKG SRGPNEVMENDMLK IAEAHGK+IAQVSL
Sbjct: 193 MNLAWQQKKLREFCNANGIVLTAFSPLRKGASRGPNEVMENDMLKGIAEAHGKSIAQVSL 252
Query: 353 RWLYEQGVTFAAKSYDKDRMNQNLQIFDWALTKEDLEKIDQIKQNRLIPGPTKPQLNDLY 174
RWLYEQGVTF AKSYDK+RMNQNLQIFDW LT ED +KIDQIKQNRLIPGPTKPQLNDL+
Sbjct: 253 RWLYEQGVTFVAKSYDKERMNQNLQIFDWELTTEDHQKIDQIKQNRLIPGPTKPQLNDLW 312
Query: 173 DD 168
DD
Sbjct: 313 DD 314
>pir||S48850 chalcone reductase (EC 1.-.-.-) - alfalfa gi|563538|emb|CAA57784.1|
chalcone reductase [Medicago sativa]
Length = 312
Score = 230 bits (586), Expect = 9e-60
Identities = 109/122 (89%), Positives = 116/122 (94%)
Frame = -2
Query: 533 MNLAWQQKELREFCNANGIVLTAFSPLRKGGSRGPNEVMENDMLKEIAEAHGKTIAQVSL 354
MNLAWQQK+LREFCNANGIVLTAFSPLRKG SRGPNEVMENDMLKEIA+AHGK++AQ+SL
Sbjct: 191 MNLAWQQKKLREFCNANGIVLTAFSPLRKGASRGPNEVMENDMLKEIADAHGKSVAQISL 250
Query: 353 RWLYEQGVTFAAKSYDKDRMNQNLQIFDWALTKEDLEKIDQIKQNRLIPGPTKPQLNDLY 174
RWLYEQGVTF KSYDK+RMNQNL IFDW+LTKED EKIDQIKQNRLIPGPTKP LNDLY
Sbjct: 251 RWLYEQGVTFVPKSYDKERMNQNLCIFDWSLTKEDHEKIDQIKQNRLIPGPTKPGLNDLY 310
Query: 173 DD 168
DD
Sbjct: 311 DD 312
>gb|AAB41556.1| chalcone reductase gi|1096530|prf||2111449B chalcone reductase
Length = 312
Score = 230 bits (586), Expect = 9e-60
Identities = 109/122 (89%), Positives = 116/122 (94%)
Frame = -2
Query: 533 MNLAWQQKELREFCNANGIVLTAFSPLRKGGSRGPNEVMENDMLKEIAEAHGKTIAQVSL 354
MNLAWQQK+LREFCNANGIVLTAFSPLRKG SRGPNEVMENDMLKEIA+AHGK++AQ+SL
Sbjct: 191 MNLAWQQKKLREFCNANGIVLTAFSPLRKGASRGPNEVMENDMLKEIADAHGKSVAQISL 250
Query: 353 RWLYEQGVTFAAKSYDKDRMNQNLQIFDWALTKEDLEKIDQIKQNRLIPGPTKPQLNDLY 174
RWLYEQGVTF KSYDK+RMNQNL IFDW+LTKED EKIDQIKQNRLIPGPTKP LNDLY
Sbjct: 251 RWLYEQGVTFVPKSYDKERMNQNLCIFDWSLTKEDHEKIDQIKQNRLIPGPTKPGLNDLY 310
Query: 173 DD 168
DD
Sbjct: 311 DD 312
>pir||S48851 chalcone reductase (EC 1.-.-.-) - alfalfa gi|563540|emb|CAA57782.1|
chalcone reductase [Medicago sativa]
Length = 312
Score = 229 bits (585), Expect = 1e-59
Identities = 108/122 (88%), Positives = 117/122 (95%)
Frame = -2
Query: 533 MNLAWQQKELREFCNANGIVLTAFSPLRKGGSRGPNEVMENDMLKEIAEAHGKTIAQVSL 354
MNLAWQQK+LREFCNA+GIVLTAFSPLRKG SRGPNEVMENDMLKEIA+AHGK++AQ+SL
Sbjct: 191 MNLAWQQKKLREFCNAHGIVLTAFSPLRKGASRGPNEVMENDMLKEIADAHGKSVAQISL 250
Query: 353 RWLYEQGVTFAAKSYDKDRMNQNLQIFDWALTKEDLEKIDQIKQNRLIPGPTKPQLNDLY 174
RWLYEQGVTF KSYDK+RMNQNL+IFDW+LTKED EKIDQIKQNRLIPGPTKP LNDLY
Sbjct: 251 RWLYEQGVTFVPKSYDKERMNQNLRIFDWSLTKEDHEKIDQIKQNRLIPGPTKPGLNDLY 310
Query: 173 DD 168
DD
Sbjct: 311 DD 312
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,245,639
Number of Sequences: 1393205
Number of extensions: 8558729
Number of successful extensions: 20178
Number of sequences better than 10.0: 645
Number of HSP's better than 10.0 without gapping: 19417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19787
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
