Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001814A_C01 KMC001814A_c01
(508 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E96755 hypothetical protein F3N23.21 [imported] - Arabidops... 124 8e-28
ref|NP_565052.1| expressed protein; protein id: At1g73010.1, sup... 124 8e-28
gb|AAM63155.1| putative acid phosphatase [Arabidopsis thaliana] 123 1e-27
emb|CAD30863.1| putative phosphatase [Lycopersicon esculentum] 120 9e-27
emb|CAD30864.1| putative phosphatase [Lycopersicon esculentum] 120 9e-27
>pir||E96755 hypothetical protein F3N23.21 [imported] - Arabidopsis thaliana
gi|5903090|gb|AAD55648.1|AC008017_21 Hypothetical
protein [Arabidopsis thaliana]
Length = 188
Score = 124 bits (310), Expect = 8e-28
Identities = 62/122 (50%), Positives = 85/122 (68%), Gaps = 9/122 (7%)
Frame = -3
Query: 506 IDRIQDSFSQDDDKKIIYLGDGAGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPSLLKAE 327
I+RIQ S +++ KK+IYLGDGAGDYCPSL+L D++MPRKNFPVWDLI ++P L+KA
Sbjct: 63 IERIQQSLAKEGKKKMIYLGDGAGDYCPSLKLNTEDYVMPRKNFPVWDLISQNPMLIKAA 122
Query: 326 IHGWTDGEELEPVLLQLISQISMEKDALFM----SSDCKTQTLLISA----HEP-LPKVL 174
I WTDG+ +E +L+ I +I +E++ M ++CK QT+ I HEP LP+ L
Sbjct: 123 IREWTDGQSMEMILIGTIEEIRLEEEKEKMLTSAENNCKMQTISIGINNVHHEPILPRAL 182
Query: 173 HV 168
V
Sbjct: 183 RV 184
>ref|NP_565052.1| expressed protein; protein id: At1g73010.1, supported by cDNA:
19976. [Arabidopsis thaliana]
Length = 295
Score = 124 bits (310), Expect = 8e-28
Identities = 62/122 (50%), Positives = 85/122 (68%), Gaps = 9/122 (7%)
Frame = -3
Query: 506 IDRIQDSFSQDDDKKIIYLGDGAGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPSLLKAE 327
I+RIQ S +++ KK+IYLGDGAGDYCPSL+L D++MPRKNFPVWDLI ++P L+KA
Sbjct: 170 IERIQQSLAKEGKKKMIYLGDGAGDYCPSLKLNTEDYVMPRKNFPVWDLISQNPMLIKAA 229
Query: 326 IHGWTDGEELEPVLLQLISQISMEKDALFM----SSDCKTQTLLISA----HEP-LPKVL 174
I WTDG+ +E +L+ I +I +E++ M ++CK QT+ I HEP LP+ L
Sbjct: 230 IREWTDGQSMEMILIGTIEEIRLEEEKEKMLTSAENNCKMQTISIGINNVHHEPILPRAL 289
Query: 173 HV 168
V
Sbjct: 290 RV 291
>gb|AAM63155.1| putative acid phosphatase [Arabidopsis thaliana]
Length = 293
Score = 123 bits (309), Expect = 1e-27
Identities = 62/122 (50%), Positives = 85/122 (68%), Gaps = 9/122 (7%)
Frame = -3
Query: 506 IDRIQDSFSQDDDKKIIYLGDGAGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPSLLKAE 327
I+RIQ S +++ KK+IYLGDGAGDYCPSL+L D++MPRKNFPVWDLI ++P L+KA
Sbjct: 168 IERIQQSLAKEGKKKMIYLGDGAGDYCPSLKLNTEDYVMPRKNFPVWDLISQNPMLIKAV 227
Query: 326 IHGWTDGEELEPVLLQLISQISMEKDALFM----SSDCKTQTLLISA----HEP-LPKVL 174
I WTDG+ +E +L+ I +I +E++ M ++CK QT+ I HEP LP+ L
Sbjct: 228 IREWTDGQSMEMILIGTIEEIRLEEEKEKMLTSAENNCKMQTISIGINNVHHEPILPRAL 287
Query: 173 HV 168
V
Sbjct: 288 RV 289
>emb|CAD30863.1| putative phosphatase [Lycopersicon esculentum]
Length = 269
Score = 120 bits (301), Expect = 9e-27
Identities = 57/113 (50%), Positives = 83/113 (73%)
Frame = -3
Query: 506 IDRIQDSFSQDDDKKIIYLGDGAGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPSLLKAE 327
++RIQ +++ K++IYLGDG GD+CPSL+L + DF+MPRK+FP W+LI K+ +L+KA
Sbjct: 158 VERIQ---AKEGKKRMIYLGDGIGDFCPSLKLSEADFVMPRKDFPAWNLINKNRTLVKAT 214
Query: 326 IHGWTDGEELEPVLLQLISQISMEKDALFMSSDCKTQTLLISAHEPLPKVLHV 168
+H WT+G+ELE +LLQLI+ I+ME+ L CK T+ +AH LP+ L V
Sbjct: 215 VHEWTNGQELEHILLQLINTINMEESQLLSVDYCKLVTMSKAAHGALPQALPV 267
>emb|CAD30864.1| putative phosphatase [Lycopersicon esculentum]
Length = 269
Score = 120 bits (301), Expect = 9e-27
Identities = 57/113 (50%), Positives = 83/113 (73%)
Frame = -3
Query: 506 IDRIQDSFSQDDDKKIIYLGDGAGDYCPSLRLKQRDFMMPRKNFPVWDLICKDPSLLKAE 327
++RIQ +++ K++IYLGDG GD+CPSL+L + DF+MPRK+FP W+LI K+ +L+KA
Sbjct: 158 VERIQ---AKEGKKRMIYLGDGIGDFCPSLKLSEADFVMPRKDFPAWNLINKNRTLVKAT 214
Query: 326 IHGWTDGEELEPVLLQLISQISMEKDALFMSSDCKTQTLLISAHEPLPKVLHV 168
+H WT+G+ELE +LLQLI+ I+ME+ L CK T+ +AH LP+ L V
Sbjct: 215 VHEWTNGQELEHILLQLINTINMEESQLLSVDYCKLVTMSKAAHGALPQALPV 267
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 419,731,036
Number of Sequences: 1393205
Number of extensions: 8284323
Number of successful extensions: 19748
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 19363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19740
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
