Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001790A_C01 KMC001790A_c01
(557 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM67247.1| putative aminotransferase [Arabidopsis thaliana] 113 1e-47
ref|NP_177890.1| putative aminotransferase; protein id: At1g7767... 113 3e-47
gb|AAL67016.1| putative aminotransferase [Arabidopsis thaliana] 110 2e-46
gb|ZP_00018479.1| hypothetical protein [Chloroflexus aurantiacus] 60 2e-18
ref|NP_627852.1| putative aspartate aminotransferase [Streptomyc... 55 8e-17
>gb|AAM67247.1| putative aminotransferase [Arabidopsis thaliana]
Length = 404
Score = 113 bits (282), Expect(2) = 1e-47
Identities = 53/65 (81%), Positives = 58/65 (88%)
Frame = -1
Query: 362 HPLSGHENDVAFCEYLIKEVGVAAIPTSVFYLNPEEGKNLVRFTFCKDEETLRAAVERMK 183
H G ENDVAFCEYLI+EVGV AIPTSVFYLNPEEGKNLVRF FCKDEETLR A+ERMK
Sbjct: 334 HTPFGMENDVAFCEYLIEEVGVVAIPTSVFYLNPEEGKNLVRFAFCKDEETLRGAIERMK 393
Query: 182 EKLRK 168
+KL++
Sbjct: 394 QKLKR 398
Score = 98.6 bits (244), Expect(2) = 1e-47
Identities = 46/67 (68%), Positives = 53/67 (78%)
Frame = -2
Query: 556 HAFLTFATSNANPWAAAVALRAPDSYFVDLKRDYLAKRAILVEGLNAVGFKVFPSSGTYF 377
H++LTFATS WAA AL+AP+SYF +LKRDY AK+ LV+GL VGF VFPSSGTYF
Sbjct: 270 HSYLTFATSTPAQWAAVAALKAPESYFKELKRDYNAKKETLVKGLKEVGFTVFPSSGTYF 329
Query: 376 VVVDHTP 356
VV DHTP
Sbjct: 330 VVADHTP 336
>ref|NP_177890.1| putative aminotransferase; protein id: At1g77670.1, supported by
cDNA: 35179., supported by cDNA: gi_18377732
[Arabidopsis thaliana] gi|25315625|pir||D96806 probable
aminotransferase, 101422-99564 [imported] - Arabidopsis
thaliana gi|12323388|gb|AAG51669.1|AC010704_13 putative
aminotransferase; 101422-99564 [Arabidopsis thaliana]
Length = 440
Score = 113 bits (282), Expect(2) = 3e-47
Identities = 53/65 (81%), Positives = 58/65 (88%)
Frame = -1
Query: 362 HPLSGHENDVAFCEYLIKEVGVAAIPTSVFYLNPEEGKNLVRFTFCKDEETLRAAVERMK 183
H G ENDVAFCEYLI+EVGV AIPTSVFYLNPEEGKNLVRF FCKDEETLR A+ERMK
Sbjct: 374 HTPFGMENDVAFCEYLIEEVGVVAIPTSVFYLNPEEGKNLVRFAFCKDEETLRGAIERMK 433
Query: 182 EKLRK 168
+KL++
Sbjct: 434 QKLKR 438
Score = 97.1 bits (240), Expect(2) = 3e-47
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = -2
Query: 556 HAFLTFATSNANPWAAAVALRAPDSYFVDLKRDYLAKRAILVEGLNAVGFKVFPSSGTYF 377
H++LTFATS WAA AL+AP+SYF +LKRDY K+ LV+GL VGF VFPSSGTYF
Sbjct: 310 HSYLTFATSTPAQWAAVAALKAPESYFKELKRDYNVKKETLVKGLKEVGFTVFPSSGTYF 369
Query: 376 VVVDHTP 356
VV DHTP
Sbjct: 370 VVADHTP 376
>gb|AAL67016.1| putative aminotransferase [Arabidopsis thaliana]
Length = 440
Score = 110 bits (275), Expect(2) = 2e-46
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = -1
Query: 362 HPLSGHENDVAFCEYLIKEVGVAAIPTSVFYLNPEEGKNLVRFTFCKDEETLRAAVERMK 183
H G ENDVAFCEYLI+EVGV AIPTSVFYLNP EGKNLVRF FCKDEETLR A+ERMK
Sbjct: 374 HTPFGMENDVAFCEYLIEEVGVVAIPTSVFYLNPGEGKNLVRFAFCKDEETLRGAIERMK 433
Query: 182 EKLRK 168
+KL++
Sbjct: 434 QKLKR 438
Score = 97.1 bits (240), Expect(2) = 2e-46
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = -2
Query: 556 HAFLTFATSNANPWAAAVALRAPDSYFVDLKRDYLAKRAILVEGLNAVGFKVFPSSGTYF 377
H++LTFATS WAA AL+AP+SYF +LKRDY K+ LV+GL VGF VFPSSGTYF
Sbjct: 310 HSYLTFATSTPAQWAAVAALKAPESYFKELKRDYNVKKETLVKGLKEVGFTVFPSSGTYF 369
Query: 376 VVVDHTP 356
VV DHTP
Sbjct: 370 VVADHTP 376
>gb|ZP_00018479.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 422
Score = 60.5 bits (145), Expect(2) = 2e-18
Identities = 30/56 (53%), Positives = 36/56 (63%)
Frame = -1
Query: 353 SGHENDVAFCEYLIKEVGVAAIPTSVFYLNPEEGKNLVRFTFCKDEETLRAAVERM 186
+G +DV FC YL +EVGVAAIP S FY + L RF F K ETLRAA +R+
Sbjct: 360 TGFHDDVTFCRYLTQEVGVAAIPPSAFYARQHDLPLLARFCFAKRPETLRAAQQRL 415
Score = 53.1 bits (126), Expect(2) = 2e-18
Identities = 27/70 (38%), Positives = 43/70 (60%), Gaps = 2/70 (2%)
Frame = -2
Query: 556 HAFLTFATSNANPWAAAVALRAP--DSYFVDLKRDYLAKRAILVEGLNAVGFKVFPSSGT 383
H ++TFAT+ +AAA AL + Y+ + +Y A+ +L E L +VGF V P+ G+
Sbjct: 291 HQWITFATATPLQFAAAAALEGALHNGYYEQFRAEYTARYRLLEEILVSVGFPVLPTEGS 350
Query: 382 YFVVVDHTPS 353
YF++ D TP+
Sbjct: 351 YFLMADITPT 360
>ref|NP_627852.1| putative aspartate aminotransferase [Streptomyces coelicolor A3(2)]
gi|7480478|pir||T36548 probable transaminase (EC
2.6.1.-) SCH10.36 [similarity] - Streptomyces coelicolor
gi|4753882|emb|CAB42045.1| putative aspartate
aminotransferase [Streptomyces coelicolor A3(2)]
Length = 396
Score = 55.5 bits (132), Expect(2) = 8e-17
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = -2
Query: 550 FLTFATSNANPWAAAVALRAPDSYFVDLKRDYLAKRAILVEGLNAVGFKVFPSSGTYFVV 371
+LT+ S +A A AL P+SYF ++D AKR +L GL GF V+ +GTYFV
Sbjct: 271 YLTYVASGPFQYAVAEALALPESYFAAYRQDMEAKRDLLAAGLAEAGFGVYRPAGTYFVT 330
Query: 370 VDHTP 356
D P
Sbjct: 331 TDIRP 335
Score = 52.8 bits (125), Expect(2) = 8e-17
Identities = 26/56 (46%), Positives = 32/56 (56%)
Frame = -1
Query: 350 GHENDVAFCEYLIKEVGVAAIPTSVFYLNPEEGKNLVRFTFCKDEETLRAAVERMK 183
G + AFC L + GV A+P +VFY + EEG VRF FCK L AV R+K
Sbjct: 337 GERDGFAFCRSLPERAGVVAVPNAVFYNHREEGAPFVRFAFCKRLPVLEEAVGRLK 392
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 499,614,774
Number of Sequences: 1393205
Number of extensions: 10883045
Number of successful extensions: 24922
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 23972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24864
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
