Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001785A_C01 KMC001785A_c01
(891 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_174753.1| hyoscyamine 6-dioxygenase hydroxylase, putative... 224 2e-57
dbj|BAB03425.1| unnamed protein product [Oryza sativa (japonica ... 216 3e-55
ref|NP_190232.1| putative protein; protein id: At3g46480.1 [Arab... 198 8e-50
ref|NP_190233.1| putative protein; protein id: At3g46490.1 [Arab... 179 5e-44
ref|NP_190234.1| putative protein; protein id: At3g46500.1 [Arab... 176 6e-43
>ref|NP_174753.1| hyoscyamine 6-dioxygenase hydroxylase, putative; protein id:
At1g35190.1, supported by cDNA: 2551., supported by
cDNA: gi_13926296 [Arabidopsis thaliana]
gi|25285682|pir||G86472 probable hyoscyamine
6-dioxygenase hydroxylase [imported] - Arabidopsis
thaliana gi|12320957|gb|AAG50602.1|AC079605_7
hyoscyamine 6-dioxygenase hydroxylase, putative
[Arabidopsis thaliana]
Length = 329
Score = 224 bits (570), Expect = 2e-57
Identities = 100/136 (73%), Positives = 119/136 (86%)
Frame = -3
Query: 889 SKGLYGAGAHTDFGLITLLATDDVSGLQICKDRDAKPQIWEDVAPLKGAFIVNLGDMLER 710
SKG+Y GAH+DFG++TLLATD V GLQICKD++A PQ WE V P+KGAFIVNLGDMLER
Sbjct: 193 SKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLER 252
Query: 709 WSNGVFKSTLHRVLGNGQERYSIAYFLEPSHDCLVECLPTCKSDSNPPQFPPILCRDYLS 530
WSNG FKSTLHRVLGNGQERYSI +F+EP+HDCLVECLPTCKS+S P++PPI C YL+
Sbjct: 253 WSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCKSESELPKYPPIKCSTYLT 312
Query: 529 QRYNDTHADLNVYQKQ 482
QRY +THA+L++Y +Q
Sbjct: 313 QRYEETHANLSIYHQQ 328
>dbj|BAB03425.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|9711833|dbj|BAB07932.1| P0512G09.14 [Oryza sativa
(japonica cultivar-group)]
Length = 304
Score = 216 bits (551), Expect = 3e-55
Identities = 99/138 (71%), Positives = 121/138 (86%)
Frame = -3
Query: 889 SKGLYGAGAHTDFGLITLLATDDVSGLQICKDRDAKPQIWEDVAPLKGAFIVNLGDMLER 710
++G++GAGAH+D+GLITLLATDDV GLQ DR+A+PQ+WE VAP+KG FIVNLGDMLER
Sbjct: 170 AEGVFGAGAHSDYGLITLLATDDVVGLQ---DRNAQPQVWEYVAPVKGGFIVNLGDMLER 226
Query: 709 WSNGVFKSTLHRVLGNGQERYSIAYFLEPSHDCLVECLPTCKSDSNPPQFPPILCRDYLS 530
WSN +F+STLHRV+ +G+ER+SIA+F+EPSHDC+VECLPTCKS+SNPP+FPPI C YLS
Sbjct: 227 WSNCIFRSTLHRVVLDGRERHSIAFFVEPSHDCVVECLPTCKSESNPPKFPPITCSAYLS 286
Query: 529 QRYNDTHADLNVYQKQQA 476
QRY DTHADL Y +A
Sbjct: 287 QRYKDTHADLTAYSSNKA 304
>ref|NP_190232.1| putative protein; protein id: At3g46480.1 [Arabidopsis thaliana]
gi|11255898|pir||T45705 hypothetical protein F18L15.200
- Arabidopsis thaliana gi|6522627|emb|CAB62039.1|
putative protein [Arabidopsis thaliana]
Length = 297
Score = 198 bits (504), Expect = 8e-50
Identities = 86/134 (64%), Positives = 115/134 (85%)
Frame = -3
Query: 886 KGLYGAGAHTDFGLITLLATDDVSGLQICKDRDAKPQIWEDVAPLKGAFIVNLGDMLERW 707
KG++G GAH+D+G++TLLATD V+GLQ D+D KP+ WE V +KGA+IVNLGD+LERW
Sbjct: 166 KGIFGCGAHSDYGMLTLLATDSVTGLQ---DKDVKPRKWEYVPSIKGAYIVNLGDLLERW 222
Query: 706 SNGVFKSTLHRVLGNGQERYSIAYFLEPSHDCLVECLPTCKSDSNPPQFPPILCRDYLSQ 527
SNG+FKSTLHRVLGNGQ+RYSI +F+EPSHDCLVECLPTC+S++N P++P I C +L+Q
Sbjct: 223 SNGIFKSTLHRVLGNGQDRYSIPFFIEPSHDCLVECLPTCQSENNLPKYPAIKCSTFLTQ 282
Query: 526 RYNDTHADLNVYQK 485
RY +H +L++Y++
Sbjct: 283 RYQQSHVNLSIYKQ 296
>ref|NP_190233.1| putative protein; protein id: At3g46490.1 [Arabidopsis thaliana]
gi|11255893|pir||T45586 hypothetical protein F12A12.10 -
Arabidopsis thaliana gi|6523052|emb|CAB62319.1| putative
protein [Arabidopsis thaliana]
Length = 306
Score = 179 bits (454), Expect = 5e-44
Identities = 78/109 (71%), Positives = 96/109 (87%)
Frame = -3
Query: 889 SKGLYGAGAHTDFGLITLLATDDVSGLQICKDRDAKPQIWEDVAPLKGAFIVNLGDMLER 710
SKG+Y GAH+DFG+++LLATD V GLQICKD+D KPQ WE +KGA+IVNLGD+LER
Sbjct: 198 SKGIYACGAHSDFGMMSLLATDGVMGLQICKDKDVKPQKWEYTPSIKGAYIVNLGDLLER 257
Query: 709 WSNGVFKSTLHRVLGNGQERYSIAYFLEPSHDCLVECLPTCKSDSNPPQ 563
WSNG FKSTLHRVLGNGQ+RYSI +FL+PSHDC++ECLPTC+S++N P+
Sbjct: 258 WSNGYFKSTLHRVLGNGQDRYSIPFFLKPSHDCIIECLPTCQSENNLPK 306
>ref|NP_190234.1| putative protein; protein id: At3g46500.1 [Arabidopsis thaliana]
gi|11255904|pir||T45587 hypothetical protein F12A12.20 -
Arabidopsis thaliana gi|6523053|emb|CAB62320.1| putative
protein [Arabidopsis thaliana]
Length = 296
Score = 176 bits (445), Expect = 6e-43
Identities = 77/109 (70%), Positives = 96/109 (87%)
Frame = -3
Query: 889 SKGLYGAGAHTDFGLITLLATDDVSGLQICKDRDAKPQIWEDVAPLKGAFIVNLGDMLER 710
SKG+YG G H+DFG++TLL TD V GLQ DRD KP+ WE + +KGA+IVN+GD+LER
Sbjct: 191 SKGIYGCGPHSDFGMMTLLGTDSVMGLQ---DRDVKPRKWEYILSIKGAYIVNIGDLLER 247
Query: 709 WSNGVFKSTLHRVLGNGQERYSIAYFLEPSHDCLVECLPTCKSDSNPPQ 563
WSNG+FKSTLHRVLGNGQ+RYSIA+FL+PSHDC+VECLPTC+S++NPP+
Sbjct: 248 WSNGIFKSTLHRVLGNGQDRYSIAFFLQPSHDCIVECLPTCQSENNPPK 296
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 734,832,969
Number of Sequences: 1393205
Number of extensions: 15917595
Number of successful extensions: 36988
Number of sequences better than 10.0: 651
Number of HSP's better than 10.0 without gapping: 34738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36263
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 48496973238
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
