Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001712A_C01 KMC001712A_c01
(642 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD56217.1| transcription factor EREBP-like protein [Cicer a... 246 2e-64
gb|AAC24587.1| AP2 domain containing protein [Prunus armeniaca] 147 1e-34
emb|CAD21849.1| ethylene responsive element binding protein [Fag... 140 1e-32
gb|AAK95687.1| transcription factor JERF1 [Lycopersicon esculentum] 118 8e-26
gb|AAF05606.1|AF190770_1 EREBP-like protein [Oryza sativa] 76 4e-13
>emb|CAD56217.1| transcription factor EREBP-like protein [Cicer arietinum]
Length = 344
Score = 246 bits (628), Expect = 2e-64
Identities = 127/173 (73%), Positives = 142/173 (81%), Gaps = 7/173 (4%)
Frame = -3
Query: 640 ESYFSSMDQVEQKPLVN---QYANMSPFPGNGAQLSPFTASADVNAYFSSEHSSNSFDYS 470
E+Y+S MDQVEQKPLVN QYANM PF GNG Q S + SADV AYFSSEHSSNSFDYS
Sbjct: 172 ENYYSPMDQVEQKPLVNNNNQYANMGPFSGNGVQHSQISPSADVTAYFSSEHSSNSFDYS 231
Query: 469 DLGWGEQGPKTPEISSMLS--APLEGESQFVQNNLQF-DSQEMLPMQDDFAKALTEELAD 299
DLGWGEQGPKTPEISSMLS APLE ESQ+VQNN+Q ++Q MLP++D+ AK L+EELAD
Sbjct: 232 DLGWGEQGPKTPEISSMLSAAAPLESESQYVQNNMQSNNNQNMLPVEDNSAKTLSEELAD 291
Query: 298 IESQLRFFEN-LDGTWDDASFDSLLSGDASQDGGNPMNLWSFDDLPAVSGGGF 143
IESQL+FFE D W DAS S L GDA+QDGGNPMNLWSFDDLP++SGG F
Sbjct: 292 IESQLKFFETPYDDNWGDASLASFLGGDATQDGGNPMNLWSFDDLPSISGGVF 344
>gb|AAC24587.1| AP2 domain containing protein [Prunus armeniaca]
Length = 280
Score = 147 bits (371), Expect = 1e-34
Identities = 81/175 (46%), Positives = 116/175 (66%), Gaps = 9/175 (5%)
Frame = -3
Query: 640 ESYFSSMDQVEQKPLVNQYANMSPFPGNGAQLSPFTASADVNAYFSSEHSSNSFDYSDLG 461
+ Y+++M +++KP N + MS FP N L T S V YF S+ SNSFD SD G
Sbjct: 112 QDYYNAMGFLDEKPPTNNFGFMSTFPANDVALKSSTPSDAVPLYFGSDQGSNSFDCSDFG 171
Query: 460 WGEQGPKTPEISSMLSAPLE--GESQFVQN-----NLQFDSQEMLPMQDDFAKALTEELA 302
WGEQG KTPEISS+LS+ +E +S F+++ L+ + ++++P+QD+ K LT+EL+
Sbjct: 172 WGEQGSKTPEISSVLSSVMEESDDSLFLEDASPTKKLRSNPEDLVPVQDNAGKTLTDELS 231
Query: 301 DIESQLRFFEN--LDGTWDDASFDSLLSGDASQDGGNPMNLWSFDDLPAVSGGGF 143
E +++F+ LDG+W DAS D+ LSGDA+QDGGN ++LW FDDL GGGF
Sbjct: 232 AFE--MKYFQTPYLDGSW-DASVDAFLSGDATQDGGNSVDLWCFDDL---VGGGF 280
>emb|CAD21849.1| ethylene responsive element binding protein [Fagus sylvatica]
Length = 375
Score = 140 bits (354), Expect = 1e-32
Identities = 81/166 (48%), Positives = 110/166 (65%), Gaps = 7/166 (4%)
Frame = -3
Query: 625 SMDQVEQKPLVNQYANMSPFPGNGAQLSPFTASADVNAYFSSEHSSNSFDYSDLGWGEQG 446
+M +E+KP NQY M P N AS + YF+S+ SNSFD SD GWGEQG
Sbjct: 210 TMGLMEEKPFTNQYGYMDSIPVNADVGLKSFASNNTAPYFNSDQGSNSFDCSDYGWGEQG 269
Query: 445 PKTPEISSMLSAPLEG-ESQFVQN-----NLQFDSQEMLPMQDDFAKALTEELADIESQL 284
KTPEISS+LSA LEG ESQFV++ L+ DS + ++++ AK L+EEL+ ESQ+
Sbjct: 270 SKTPEISSVLSATLEGDESQFVEDAVPTKKLKSDSGNAVFIENNTAKTLSEELSAFESQM 329
Query: 283 RF-FENLDGTWDDASFDSLLSGDASQDGGNPMNLWSFDDLPAVSGG 149
F L+G+W +++ ++L SGD +QD GN M+LWSFDDLP ++GG
Sbjct: 330 NFQMPFLEGSW-ESNMEALFSGDTTQD-GNSMDLWSFDDLPVMAGG 373
>gb|AAK95687.1| transcription factor JERF1 [Lycopersicon esculentum]
Length = 372
Score = 118 bits (295), Expect = 8e-26
Identities = 72/166 (43%), Positives = 98/166 (58%), Gaps = 10/166 (6%)
Frame = -3
Query: 610 EQKPLVNQYA--NMSPFPGNGAQLSPFTASADVNAYFSSEHSSNSFDYSDLGWGEQGPKT 437
E+KP QY N+S F L + SA N YFSS+ +SN+FD SD GW E +T
Sbjct: 209 EEKPATKQYGFENVS-FTAVDMGLGSVSPSAGTNVYFSSDEASNTFDCSDFGWAEPCART 267
Query: 436 PEISSMLSAPLE-GESQF-----VQNNLQFDSQEMLPMQDDFAKALTEELADIESQLRFF 275
PEISS+LS LE E+ F + L+ S L + + L+EEL+ ESQ++F
Sbjct: 268 PEISSVLSEVLETNETHFDDDSRPEKKLKSCSSTSLTVDGNTVNTLSEELSAFESQMKFL 327
Query: 274 E--NLDGTWDDASFDSLLSGDASQDGGNPMNLWSFDDLPAVSGGGF 143
+ L+G W DAS D+ L+ A QDGGN M+LWSFDD+P++ GG +
Sbjct: 328 QIPYLEGNW-DASVDAFLNTSAIQDGGNAMDLWSFDDVPSLMGGAY 372
>gb|AAF05606.1|AF190770_1 EREBP-like protein [Oryza sativa]
Length = 362
Score = 75.9 bits (185), Expect = 4e-13
Identities = 60/158 (37%), Positives = 84/158 (52%), Gaps = 2/158 (1%)
Frame = -3
Query: 631 FSSMDQVEQKPLVNQYANMSPFPGNGAQLSPFTASADVNAYFSSEHSSNSFDYSDLGWGE 452
+ +++ Q+P V Q N+S P A D SS+ SNSF SD E
Sbjct: 217 YPAVEYTLQEPFV-QIQNVSFVPA-------MNAIEDTFVNLSSDQGSNSFGCSDFSQ-E 267
Query: 451 QGPKTPEISSMLSAPLEG--ESQFVQNNLQFDSQEMLPMQDDFAKALTEELADIESQLRF 278
KTP+I+SML+ + G +S F+QNN S M+P A +LAD+E ++F
Sbjct: 268 NDIKTPDITSMLAPTMTGVDDSAFLQNNA---SDAMVPPVMGNASI---DLADLEPYMKF 321
Query: 277 FENLDGTWDDASFDSLLSGDASQDGGNPMNLWSFDDLP 164
+DG D+ S D+LLS D SQD + M+LWSFDD+P
Sbjct: 322 L--IDGGSDE-SIDTLLSSDGSQDVASSMDLWSFDDMP 356
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 545,591,194
Number of Sequences: 1393205
Number of extensions: 11494340
Number of successful extensions: 36494
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 34456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36343
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
