Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001705A_C02 KMC001705A_c02
(505 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA70330.1| dioxygenase [Marah macrocarpus] 161 3e-39
gb|AAF13735.1|AF101383_1 gibberellin 2 beta-hydroxylase [Pisum s... 157 5e-38
gb|AAF08609.1|AF056935_1 gibberellin 2-beta-hydroxylase [Pisum s... 157 5e-38
gb|AAD45425.1| gibberellin 2-oxidase [Pisum sativum] 157 5e-38
emb|CAC83090.1| gibberellin 2-oxidase [Cucurbita maxima] 150 6e-36
>emb|CAA70330.1| dioxygenase [Marah macrocarpus]
Length = 322
Score = 161 bits (408), Expect = 3e-39
Identities = 80/93 (86%), Positives = 85/93 (91%)
Frame = -2
Query: 504 FINVGDSLQVMTNGRFRSVKHRLLANGFRSRLSMIYFGGPPLSEKIAPLPSLMKGGKEES 325
FINVGDSLQVMTNGRF+SVKHR+L N +SR+SMIYFGGPPLSEKIAPLPSLMKG EES
Sbjct: 232 FINVGDSLQVMTNGRFKSVKHRVLTNSLKSRISMIYFGGPPLSEKIAPLPSLMKG--EES 289
Query: 324 LYKEFTWFEYKNSSYGSRLADNRLGHFERIAAS 226
LYKEFTWFEYK S+Y SRLADNRL HFERIAAS
Sbjct: 290 LYKEFTWFEYKRSAYNSRLADNRLVHFERIAAS 322
>gb|AAF13735.1|AF101383_1 gibberellin 2 beta-hydroxylase [Pisum sativum]
Length = 327
Score = 157 bits (398), Expect = 5e-38
Identities = 78/93 (83%), Positives = 87/93 (92%)
Frame = -2
Query: 504 FINVGDSLQVMTNGRFRSVKHRLLANGFRSRLSMIYFGGPPLSEKIAPLPSLMKGGKEES 325
FINVGDSLQVMTNGRF+SV+HR+LANG RLSMIYF GPPLSEKIAPLPSLMKG +ES
Sbjct: 237 FINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLMKG--KES 294
Query: 324 LYKEFTWFEYKNSSYGSRLADNRLGHFERIAAS 226
LYKEFTWFEYK+S+YGSRLADNRLG++ERIAA+
Sbjct: 295 LYKEFTWFEYKSSTYGSRLADNRLGNYERIAAT 327
>gb|AAF08609.1|AF056935_1 gibberellin 2-beta-hydroxylase [Pisum sativum]
Length = 327
Score = 157 bits (398), Expect = 5e-38
Identities = 78/93 (83%), Positives = 87/93 (92%)
Frame = -2
Query: 504 FINVGDSLQVMTNGRFRSVKHRLLANGFRSRLSMIYFGGPPLSEKIAPLPSLMKGGKEES 325
FINVGDSLQVMTNGRF+SV+HR+LANG RLSMIYF GPPLSEKIAPLPSLMKG +ES
Sbjct: 237 FINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLMKG--KES 294
Query: 324 LYKEFTWFEYKNSSYGSRLADNRLGHFERIAAS 226
LYKEFTWFEYK+S+YGSRLADNRLG++ERIAA+
Sbjct: 295 LYKEFTWFEYKSSTYGSRLADNRLGNYERIAAT 327
>gb|AAD45425.1| gibberellin 2-oxidase [Pisum sativum]
Length = 322
Score = 157 bits (398), Expect = 5e-38
Identities = 78/93 (83%), Positives = 87/93 (92%)
Frame = -2
Query: 504 FINVGDSLQVMTNGRFRSVKHRLLANGFRSRLSMIYFGGPPLSEKIAPLPSLMKGGKEES 325
FINVGDSLQVMTNGRF+SV+HR+LANG RLSMIYF GPPLSEKIAPLPSLMKG +ES
Sbjct: 232 FINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLMKG--KES 289
Query: 324 LYKEFTWFEYKNSSYGSRLADNRLGHFERIAAS 226
LYKEFTWFEYK+S+YGSRLADNRLG++ERIAA+
Sbjct: 290 LYKEFTWFEYKSSTYGSRLADNRLGNYERIAAT 322
>emb|CAC83090.1| gibberellin 2-oxidase [Cucurbita maxima]
Length = 321
Score = 150 bits (380), Expect = 6e-36
Identities = 76/93 (81%), Positives = 83/93 (88%)
Frame = -2
Query: 504 FINVGDSLQVMTNGRFRSVKHRLLANGFRSRLSMIYFGGPPLSEKIAPLPSLMKGGKEES 325
FINVGDSLQVMTNGRF+SVKHR+L N +SR+SMIYFGGPPLSEKIAPL SLM+ G+E S
Sbjct: 230 FINVGDSLQVMTNGRFKSVKHRVLTNSSKSRVSMIYFGGPPLSEKIAPLASLMQ-GEERS 288
Query: 324 LYKEFTWFEYKNSSYGSRLADNRLGHFERIAAS 226
LYKEFTWFEYK S+Y SRLADNRL FERIAAS
Sbjct: 289 LYKEFTWFEYKRSAYNSRLADNRLVPFERIAAS 321
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 425,693,738
Number of Sequences: 1393205
Number of extensions: 8909028
Number of successful extensions: 18904
Number of sequences better than 10.0: 521
Number of HSP's better than 10.0 without gapping: 18409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18875
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
