Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001685A_C01 KMC001685A_c01
(828 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK29410.1|AF346306_1 S-adenosyl-L-methionine synthetase [Ela... 518 e-146
dbj|BAB83761.1| S-adenosylmethionine synthetase [Phaseolus lunatus] 518 e-146
sp|Q96551|METK_CATRO S-adenosylmethionine synthetase 1 (Methioni... 518 e-146
sp|P49613|METL_PEA S-adenosylmethionine synthetase 2 (Methionine... 517 e-146
sp|Q96552|METL_CATRO S-adenosylmethionine synthetase 2 (Methioni... 517 e-146
>gb|AAK29410.1|AF346306_1 S-adenosyl-L-methionine synthetase [Elaeagnus umbellata]
Length = 393
Score = 518 bits (1335), Expect = e-146
Identities = 250/259 (96%), Positives = 255/259 (97%)
Frame = +1
Query: 52 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 231
METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPDSKVACETC+KTNMVMVFGEITTK
Sbjct: 1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTK 60
Query: 232 ANVDYEKIVRTTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 411
ANVDYEKIVR TCR IGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 61 ANVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 120
Query: 412 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNEK 591
GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRK+GTCPWLRPDGKTQVTVEY+N+K
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDK 180
Query: 592 GAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVI 771
GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVI
Sbjct: 181 GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVI 240
Query: 772 GGPHGDAGLTGRKIIIDTY 828
GGPHGDAGLTGRKIIIDTY
Sbjct: 241 GGPHGDAGLTGRKIIIDTY 259
>dbj|BAB83761.1| S-adenosylmethionine synthetase [Phaseolus lunatus]
Length = 392
Score = 518 bits (1333), Expect = e-146
Identities = 248/258 (96%), Positives = 256/258 (99%)
Frame = +1
Query: 55 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKA 234
ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTN+VMVFGEITTKA
Sbjct: 3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKA 62
Query: 235 NVDYEKIVRTTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAG 414
NVDYEKIVR TCRNIGF+S+DVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAG
Sbjct: 63 NVDYEKIVRDTCRNIGFISNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAG 122
Query: 415 DQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNEKG 594
DQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTC WLRPDGKTQVTVEY+N+KG
Sbjct: 123 DQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYYNDKG 182
Query: 595 AMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIG 774
AMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPV+PEKYLDEKTIFHLNPSGRFVIG
Sbjct: 183 AMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIG 242
Query: 775 GPHGDAGLTGRKIIIDTY 828
GPHGDAGLTGRKIIIDTY
Sbjct: 243 GPHGDAGLTGRKIIIDTY 260
>sp|Q96551|METK_CATRO S-adenosylmethionine synthetase 1 (Methionine adenosyltransferase
1) (AdoMet synthetase 1) gi|1655576|emb|CAA95856.1|
S-adenosyl-L-methionine synthetase 1 [Catharanthus
roseus]
Length = 393
Score = 518 bits (1333), Expect = e-146
Identities = 248/259 (95%), Positives = 255/259 (97%)
Frame = +1
Query: 52 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 231
METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK
Sbjct: 1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 60
Query: 232 ANVDYEKIVRTTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 411
A VDYEKIVR TCR+IGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA
Sbjct: 61 ATVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
Query: 412 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNEK 591
GDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEY+NE
Sbjct: 121 GDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
Query: 592 GAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVI 771
GAMVP+RVHTV+ISTQHDETVTND+IAADLKEHVIKPV+PEKYLDE+TIFHLNPSGRFVI
Sbjct: 181 GAMVPVRVHTVVISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDERTIFHLNPSGRFVI 240
Query: 772 GGPHGDAGLTGRKIIIDTY 828
GGPHGDAGLTGRKIIIDTY
Sbjct: 241 GGPHGDAGLTGRKIIIDTY 259
>sp|P49613|METL_PEA S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase
2) (AdoMet synthetase 2) gi|609225|emb|CAA57581.1|
methionine adenosyltransferase [Pisum sativum]
gi|609559|gb|AAA58773.1| S-adenosylmethionine synthase
Length = 374
Score = 517 bits (1332), Expect = e-146
Identities = 250/261 (95%), Positives = 255/261 (96%)
Frame = +1
Query: 46 MAMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEIT 225
MA ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEIT
Sbjct: 1 MATETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEIT 60
Query: 226 TKANVDYEKIVRTTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEI 405
TKANVDYEKIVR TCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPE+I
Sbjct: 61 TKANVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDI 120
Query: 406 GAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFN 585
GAGDQGHMFGYATDETPE MPLSHVLATKLGA LTEVRKNGTCPWLRPDGKTQVTVEY+N
Sbjct: 121 GAGDQGHMFGYATDETPEFMPLSHVLATKLGASLTEVRKNGTCPWLRPDGKTQVTVEYYN 180
Query: 586 EKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRF 765
+KGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPV+PEKYLDEKTIFHLNPSGRF
Sbjct: 181 DKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRF 240
Query: 766 VIGGPHGDAGLTGRKIIIDTY 828
GGPHGDAGLTGRKIIIDTY
Sbjct: 241 RHGGPHGDAGLTGRKIIIDTY 261
>sp|Q96552|METL_CATRO S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase
2) (AdoMet synthetase 2) gi|1655578|emb|CAA95857.1|
S-adenosyl-L-methionine synthetase 2 [Catharanthus
roseus]
Length = 393
Score = 517 bits (1332), Expect = e-146
Identities = 251/259 (96%), Positives = 254/259 (97%)
Frame = +1
Query: 52 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 231
METFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTK
Sbjct: 1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTK 60
Query: 232 ANVDYEKIVRTTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 411
A VDYEKIVR TCR IGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA
Sbjct: 61 AQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
Query: 412 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYFNEK 591
GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEY+N+
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 180
Query: 592 GAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVI 771
GAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVI
Sbjct: 181 GAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVI 240
Query: 772 GGPHGDAGLTGRKIIIDTY 828
GGPHGDAGLTGRKIIIDTY
Sbjct: 241 GGPHGDAGLTGRKIIIDTY 259
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 777,230,591
Number of Sequences: 1393205
Number of extensions: 18999126
Number of successful extensions: 66678
Number of sequences better than 10.0: 366
Number of HSP's better than 10.0 without gapping: 59458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65279
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 42643890261
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
