Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001645A_C01 KMC001645A_c01
(978 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD40682.1| OSJNBb0118P14.20 [Oryza sativa (japonica cultiva... 154 2e-36
ref|NP_186856.1| unknown protein; protein id: At3g02070.1 [Arabi... 153 3e-36
gb|AAM61570.1| unknown [Arabidopsis thaliana] 122 6e-27
ref|NP_566704.1| expressed protein; protein id: At3g22260.1, sup... 122 6e-27
ref|NP_568136.1| putative protein; protein id: At5g04250.1, supp... 103 3e-21
>emb|CAD40682.1| OSJNBb0118P14.20 [Oryza sativa (japonica cultivar-group)]
Length = 225
Score = 154 bits (390), Expect = 2e-36
Identities = 68/81 (83%), Positives = 75/81 (91%)
Frame = -1
Query: 978 KMAKLGEWGDHVTLQAASDKFAAKICLLTSFRDTCFIEIMPLYQAPQREIWLSFWSEVHY 799
KM K GEWGDHVTLQAA+DKFAAKICLLTSFRDTCF+EI+P YQAPQREIWLSFWSEVHY
Sbjct: 143 KMKKSGEWGDHVTLQAAADKFAAKICLLTSFRDTCFVEIVPQYQAPQREIWLSFWSEVHY 202
Query: 798 NSLYEVRDAPIQHKPKKKHWL 736
NSLY+ RD P ++KP+KKHWL
Sbjct: 203 NSLYDARDLPSKYKPRKKHWL 223
>ref|NP_186856.1| unknown protein; protein id: At3g02070.1 [Arabidopsis thaliana]
gi|6513925|gb|AAF14829.1|AC011664_11 unknown protein
[Arabidopsis thaliana]
Length = 219
Score = 153 bits (387), Expect = 3e-36
Identities = 65/82 (79%), Positives = 76/82 (92%)
Frame = -1
Query: 978 KMAKLGEWGDHVTLQAASDKFAAKICLLTSFRDTCFIEIMPLYQAPQREIWLSFWSEVHY 799
KM K GEWGDH+TLQAA+D+FAAKICLLTSFRDTCFIEI+P YQAP+ +WLSFWSEVHY
Sbjct: 138 KMGKFGEWGDHITLQAAADRFAAKICLLTSFRDTCFIEIIPQYQAPKGVLWLSFWSEVHY 197
Query: 798 NSLYEVRDAPIQHKPKKKHWLF 733
NSLY+++ AP+QHKPK+KHWLF
Sbjct: 198 NSLYDIQAAPVQHKPKRKHWLF 219
>gb|AAM61570.1| unknown [Arabidopsis thaliana]
Length = 240
Score = 122 bits (307), Expect = 6e-27
Identities = 57/82 (69%), Positives = 66/82 (79%)
Frame = -1
Query: 978 KMAKLGEWGDHVTLQAASDKFAAKICLLTSFRDTCFIEIMPLYQAPQREIWLSFWSEVHY 799
KM K GEWGDHVTLQAA+D+F AKICL+TSFRD +IEI+P + P RE WLSFWSEVHY
Sbjct: 160 KMKKHGEWGDHVTLQAAADRFEAKICLVTSFRDQSYIEILPHNKNPLREAWLSFWSEVHY 219
Query: 798 NSLYEVRDAPIQHKPKKKHWLF 733
NSLY D P + KP++KHWLF
Sbjct: 220 NSLYANGDVPTR-KPRRKHWLF 240
>ref|NP_566704.1| expressed protein; protein id: At3g22260.1, supported by cDNA:
124466. [Arabidopsis thaliana]
Length = 240
Score = 122 bits (307), Expect = 6e-27
Identities = 57/82 (69%), Positives = 66/82 (79%)
Frame = -1
Query: 978 KMAKLGEWGDHVTLQAASDKFAAKICLLTSFRDTCFIEIMPLYQAPQREIWLSFWSEVHY 799
KM K GEWGDHVTLQAA+D+F AKICL+TSFRD +IEI+P + P RE WLSFWSEVHY
Sbjct: 160 KMKKHGEWGDHVTLQAAADRFEAKICLVTSFRDQSYIEILPHNKNPLREAWLSFWSEVHY 219
Query: 798 NSLYEVRDAPIQHKPKKKHWLF 733
NSLY D P + KP++KHWLF
Sbjct: 220 NSLYANGDVPTR-KPRRKHWLF 240
>ref|NP_568136.1| putative protein; protein id: At5g04250.1, supported by cDNA:
29990. [Arabidopsis thaliana] gi|21592575|gb|AAM64524.1|
unknown [Arabidopsis thaliana]
Length = 345
Score = 103 bits (258), Expect = 3e-21
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = -1
Query: 975 MAKLGEWGDHVTLQAASDKFAAKICLLTSFRDTCFIEIMPLYQAPQREIWLSFWSEVHYN 796
M + GEWGDHVTLQAA+D F ++ ++TSF+DTC+IEI+P +Q R I LSFW+EVHYN
Sbjct: 264 MKRNGEWGDHVTLQAAADLFGVRMFVITSFKDTCYIEILPHFQKSNRLICLSFWAEVHYN 323
Query: 795 SLYEVRDAPI-QHKPKKKHWLF 733
S+Y + PI + K KKK+W+F
Sbjct: 324 SIYPEGELPIPEGKKKKKYWVF 345
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 785,353,706
Number of Sequences: 1393205
Number of extensions: 16331019
Number of successful extensions: 28817
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 27879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28809
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 56019656464
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
