KMC001581A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC001581A_C02 KMC001581A_c02
atgtGTAAACAAAGCAAAACCACAAATGTTGATTAAGTTGAATTTGGTAGGTGCTATATT
GACCTTTATTACAAAAGAAAATTCACAGTACAATGCGAAGAAATTAACACAAGAACTCTA
CTTAACTATTGGAATGAACCCTGTACTTTGGGAGAGCAGCAATGAAATCTTCAATGTATT
GATTATGAAGATCTTCAGAACTGAAAACCTTGCCCATCTCTTTGGCATTCTTCCTGTAGA
TACTCCCTTCCTCATCCACTATTGCTAACTTCAATGTCTTCGCCACGGAGTCCCTAGTAA
AGGATCCATCTTGTTCATTCCTTGGCACCTCAATAGCCACTTTCTTTTCTTCTAATGCTC
TTGAAAACAGACACTGATCCAGCAAATAAGGCAGGGTCACAAGAACATGCCCAAAATGAA
CCTTCTCAATTGCAGAACCTGAACCACAGTGACTCATGCACCCTCCAATGACACCATGAG
CCAAGATCTTAAGCTGGGGTGCCCATGTTTTCCAAACAACCCCACGTTCCTTGGTTCTGT
GCTCAAACCCCTCAGGTAACTCAAGTGAACCCTCTTTCAAGTTCTT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC001581A_C02 KMC001581A_c02
         (586 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM53963.1|AF515727_1 UDP-glucosyltransferase [Stevia rebaudi...   158  4e-38
gb|AAM12787.1| putative anthocyanidine rhamnosyl-transferase [Ca...   146  2e-34
dbj|BAC43110.1| putative anthocyanidin-3-glucoside rhamnosyltran...   145  5e-34
ref|NP_201358.1| anthocyanidin-3-glucoside rhamnosyltransferase;...   145  5e-34
gb|AAK96560.1| At2g22590/T9I22.3 [Arabidopsis thaliana] gi|17380...   135  3e-31

>gb|AAM53963.1|AF515727_1 UDP-glucosyltransferase [Stevia rebaudiana]
          Length = 473

 Score =  158 bits (400), Expect = 4e-38
 Identities = 69/144 (47%), Positives = 105/144 (72%)
 Frame = -1

Query: 577 KEGSLELPEGFEHRTKERGVVWKTWAPQLKILAHGVIGGCMSHCGSGSAIEKVHFGHVLV 398
           K  S+ELP+GF  RT++RG+VW +WAPQL+IL+H  + G ++HCGSGS +E + FGH L+
Sbjct: 319 KSDSVELPDGFVERTRDRGLVWTSWAPQLRILSHESVCGFLTHCGSGSIVEGLMFGHPLI 378

Query: 397 TLPYLLDQCLFSRALEEKKVAIEVPRNEQDGSFTRDSVAKTLKLAIVDEEGSIYRKNAKE 218
            LP   DQ L +R LE+K+V IE+PRNE+DG  T++SVA++L+  +V+ EG IY+ NA+E
Sbjct: 379 MLPLFGDQPLNARLLEDKQVGIEIPRNEEDGCLTKESVARSLRSVVVENEGEIYKANARE 438

Query: 217 MGKVFSSEDLHNQYIEDFIAALPK 146
           + K+++   +  +Y+  F+  L K
Sbjct: 439 LSKIYNDTKVEKEYVSQFVDYLEK 462

>gb|AAM12787.1| putative anthocyanidine rhamnosyl-transferase [Capsicum annuum]
          Length = 470

 Score =  146 bits (368), Expect = 2e-34
 Identities = 69/140 (49%), Positives = 98/140 (69%)
 Frame = -1

Query: 559 LPEGFEHRTKERGVVWKTWAPQLKILAHGVIGGCMSHCGSGSAIEKVHFGHVLVTLPYLL 380
           LPEGFE RTK RG+V  +WAPQLKIL+H  IGG ++H G  S +E + F   LV L +L 
Sbjct: 327 LPEGFEERTKGRGIVCTSWAPQLKILSHDSIGGFLTHSGWSSVVEAIQFEKPLVLLTFLA 386

Query: 379 DQCLFSRALEEKKVAIEVPRNEQDGSFTRDSVAKTLKLAIVDEEGSIYRKNAKEMGKVFS 200
           DQ + +R LEEKK+A  +PRN++DGSFTRDSVA+++ + +V EEG IYRK  KE+  +F 
Sbjct: 387 DQGINARLLEEKKMAYSIPRNDRDGSFTRDSVAESVSMVLVKEEGEIYRKKVKEVKYLFC 446

Query: 199 SEDLHNQYIEDFIAALPKYR 140
            +   + Y+++ ++ L  Y+
Sbjct: 447 DKKRQDNYVKNLLSYLQNYK 466

>dbj|BAC43110.1| putative anthocyanidin-3-glucoside rhamnosyltransferase
           [Arabidopsis thaliana]
          Length = 466

 Score =  145 bits (365), Expect = 5e-34
 Identities = 69/140 (49%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
 Frame = -1

Query: 568 SLELPEGFEHRTKERGVVWKTWAPQLKILAHGVIGGCMSHCGSGSAIEKVHFGHVLVTLP 389
           S+ LP+GF+ R KERGV+W  W PQ KIL+HG +GG ++HCG GSA+E + FG  L+  P
Sbjct: 320 SMLLPDGFKERVKERGVIWTEWVPQTKILSHGSVGGFVTHCGWGSAVEGLSFGVPLIMFP 379

Query: 388 YLLDQCLFSRALEEKKVAIEVPRNEQDGSFTRDSVAKTLKLAIVDEEGSIYRKN-AKEMG 212
             LDQ L +R L    + +E+PRNE+DG FT  SVA+T++  +V+EEG IYR N A +  
Sbjct: 380 CNLDQPLVARLLSGMNIGLEIPRNERDGLFTSASVAETIRHVVVEEEGKIYRNNGASQQK 439

Query: 211 KVFSSEDLHNQYIEDFIAAL 152
           K+F ++ L +QY + FI  L
Sbjct: 440 KIFGNKRLQDQYADGFIEFL 459

>ref|NP_201358.1| anthocyanidin-3-glucoside rhamnosyltransferase; protein id:
           At5g65550.1 [Arabidopsis thaliana]
          Length = 466

 Score =  145 bits (365), Expect = 5e-34
 Identities = 69/140 (49%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
 Frame = -1

Query: 568 SLELPEGFEHRTKERGVVWKTWAPQLKILAHGVIGGCMSHCGSGSAIEKVHFGHVLVTLP 389
           S+ LP+GF+ R KERGV+W  W PQ KIL+HG +GG ++HCG GSA+E + FG  L+  P
Sbjct: 320 SMLLPDGFKERVKERGVIWTEWVPQTKILSHGSVGGFVTHCGWGSAVEGLSFGVPLIMFP 379

Query: 388 YLLDQCLFSRALEEKKVAIEVPRNEQDGSFTRDSVAKTLKLAIVDEEGSIYRKN-AKEMG 212
             LDQ L +R L    + +E+PRNE+DG FT  SVA+T++  +V+EEG IYR N A +  
Sbjct: 380 CNLDQPLVARLLSGMNIGLEIPRNERDGLFTSASVAETIRHVVVEEEGKIYRNNAASQQK 439

Query: 211 KVFSSEDLHNQYIEDFIAAL 152
           K+F ++ L +QY + FI  L
Sbjct: 440 KIFGNKRLQDQYADGFIEFL 459

>gb|AAK96560.1| At2g22590/T9I22.3 [Arabidopsis thaliana] gi|17380626|gb|AAL36076.1|
           At2g22590/T9I22.3 [Arabidopsis thaliana]
          Length = 470

 Score =  135 bits (341), Expect = 3e-31
 Identities = 62/138 (44%), Positives = 94/138 (67%)
 Frame = -1

Query: 565 LELPEGFEHRTKERGVVWKTWAPQLKILAHGVIGGCMSHCGSGSAIEKVHFGHVLVTLPY 386
           +ELPEGFE RT +RG+VW+ W  QL+ L+H  IG  ++H G G+ IE + F   +  L +
Sbjct: 329 VELPEGFEERTADRGMVWRGWVEQLRTLSHDSIGLVLTHPGWGTIIEAIRFAKPMAMLVF 388

Query: 385 LLDQCLFSRALEEKKVAIEVPRNEQDGSFTRDSVAKTLKLAIVDEEGSIYRKNAKEMGKV 206
           + DQ L +R +EEKK+   +PR+E +G FT++SVA +L+L +V+EEG +YR+N KEM  V
Sbjct: 389 VYDQGLNARVIEEKKIGYMIPRDETEGFFTKESVANSLRLVMVEEEGKVYRENVKEMKGV 448

Query: 205 FSSEDLHNQYIEDFIAAL 152
           F   D  ++Y++ F+  L
Sbjct: 449 FGDMDRQDRYVDSFLEYL 466

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,169,719
Number of Sequences: 1393205
Number of extensions: 11375800
Number of successful extensions: 32576
Number of sequences better than 10.0: 549
Number of HSP's better than 10.0 without gapping: 31576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32455
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MFB026d01_f BP035880 1 493
2 MR050f03_f BP079886 5 417
3 MF040f06_f BP030401 5 492
4 MR072c01_f BP081523 5 384
5 MR050g03_f BP079894 6 381
6 MR038d08_f BP078942 6 508
7 MFB004c05_f BP034173 6 535
8 MR017b12_f BP077252 8 377
9 MR095d05_f BP083290 9 534
10 MFB092a11_f BP040694 10 512
11 SPD072g12_f BP049789 18 393
12 GNf060a01 BP071792 29 420
13 MFB008c10_f BP034472 43 593
14 GENf005c01 BP058522 47 402
15 SPD032h03_f BP046579 47 544
16 SPD091g12_f BP051300 53 475
17 GNf085a03 BP073606 63 585




Lotus japonicus
Kazusa DNA Research Institute