Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001573A_C01 KMC001573A_c01
(482 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q96451|143B_SOYBN 14-3-3-LIKE PROTEIN B (SGF14B) gi|7435033|p... 171 5e-42
dbj|BAB17821.1| vf14-3-3c protein [Vicia faba] 169 2e-41
dbj|BAB47118.1| 14-3-3 protein [Vigna angularis] 167 4e-41
sp|P93207|143A_LYCES 14-3-3 protein 10 gi|22138742|emb|CAA67374.... 161 3e-39
gb|AAF22247.1| 14-3-3 protein [Pimpinella brachycarpa] 161 3e-39
>sp|Q96451|143B_SOYBN 14-3-3-LIKE PROTEIN B (SGF14B) gi|7435033|pir||T08842 14-3-3
protein homolog SGF14B - soybean (fragment)
gi|1575727|gb|AAB09581.1| SGF14B [Glycine max]
Length = 247
Score = 171 bits (432), Expect = 5e-42
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = -2
Query: 481 DIAATDLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD 302
DIA+ DLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD
Sbjct: 162 DIASADLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD 221
Query: 301 STLIMQLLRDNLTLWTSDVQDQLDEP 224
STLIMQLLRDNLTLWTSDVQDQLDEP
Sbjct: 222 STLIMQLLRDNLTLWTSDVQDQLDEP 247
>dbj|BAB17821.1| vf14-3-3c protein [Vicia faba]
Length = 263
Score = 169 bits (427), Expect = 2e-41
Identities = 84/86 (97%), Positives = 84/86 (97%)
Frame = -2
Query: 481 DIAATDLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD 302
DIAA DLP THPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD
Sbjct: 178 DIAAADLPSTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD 237
Query: 301 STLIMQLLRDNLTLWTSDVQDQLDEP 224
STLIMQLLRDNLTLWTSDVQDQLDEP
Sbjct: 238 STLIMQLLRDNLTLWTSDVQDQLDEP 263
>dbj|BAB47118.1| 14-3-3 protein [Vigna angularis]
Length = 248
Score = 167 bits (424), Expect = 4e-41
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -2
Query: 481 DIAATDLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD 302
D+A DLPPTHPIRLGLALNFSVFYYEILNQSDKAC MAKQAFEEAIAELDTLGEESYKD
Sbjct: 163 DVAYADLPPTHPIRLGLALNFSVFYYEILNQSDKACGMAKQAFEEAIAELDTLGEESYKD 222
Query: 301 STLIMQLLRDNLTLWTSDVQDQLDEP 224
STLIMQLLRDNLTLWTSDVQDQLDEP
Sbjct: 223 STLIMQLLRDNLTLWTSDVQDQLDEP 248
>sp|P93207|143A_LYCES 14-3-3 protein 10 gi|22138742|emb|CAA67374.2| 14-3-3 protein
[Lycopersicon esculentum]
Length = 252
Score = 161 bits (408), Expect = 3e-39
Identities = 79/85 (92%), Positives = 82/85 (95%)
Frame = -2
Query: 481 DIAATDLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD 302
+IA TDLPPTHPIRLGLALNFSVFY+EILN SDKAC+MAKQAFEEAIAELDTLGEESYKD
Sbjct: 167 EIALTDLPPTHPIRLGLALNFSVFYFEILNSSDKACSMAKQAFEEAIAELDTLGEESYKD 226
Query: 301 STLIMQLLRDNLTLWTSDVQDQLDE 227
STLIMQLLRDNLTLWTSD QDQLDE
Sbjct: 227 STLIMQLLRDNLTLWTSDAQDQLDE 251
>gb|AAF22247.1| 14-3-3 protein [Pimpinella brachycarpa]
Length = 130
Score = 161 bits (408), Expect = 3e-39
Identities = 80/86 (93%), Positives = 81/86 (94%)
Frame = -2
Query: 481 DIAATDLPPTHPIRLGLALNFSVFYYEILNQSDKACAMAKQAFEEAIAELDTLGEESYKD 302
DIA DL PTHPIRLGLALNFSVFYYEILN SDKAC+MAKQAFEEAIAELDTLGEESYKD
Sbjct: 45 DIALADLAPTHPIRLGLALNFSVFYYEILNSSDKACSMAKQAFEEAIAELDTLGEESYKD 104
Query: 301 STLIMQLLRDNLTLWTSDVQDQLDEP 224
STLIMQLLRDNLTLWTSD QDQLDEP
Sbjct: 105 STLIMQLLRDNLTLWTSDSQDQLDEP 130
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 407,100,842
Number of Sequences: 1393205
Number of extensions: 8052955
Number of successful extensions: 21702
Number of sequences better than 10.0: 324
Number of HSP's better than 10.0 without gapping: 21142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21690
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13689082854
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
