Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001534A_C01 KMC001534A_c01
(427 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199565.1| putative protein; protein id: At5g47540.1 [Arab... 60 8e-09
sp|Q9FGK3|MO2N_ARATH Hypothetical MO25-like protein At5g47540 gi... 60 8e-09
dbj|BAC22269.1| putative MO25 protein (CGI-66) [Oryza sativa (ja... 53 8e-07
ref|NP_193460.1| putative protein; protein id: At4g17270.1, supp... 53 8e-07
ref|NP_178440.1| unknown protein; protein id: At2g03410.1 [Arabi... 48 3e-05
>ref|NP_199565.1| putative protein; protein id: At5g47540.1 [Arabidopsis thaliana]
Length = 344
Score = 59.7 bits (143), Expect = 8e-09
Identities = 34/61 (55%), Positives = 43/61 (69%), Gaps = 9/61 (14%)
Frame = +2
Query: 272 MKTLFKTKPRTPSEWVRHTRDLLRL---------LQQTKLDDKQMPELNRNIRDIKTILY 424
MK LFK+KPRTP++ VR TRDLL L+ +K D+K M EL+RNIRD+K+ILY
Sbjct: 1 MKGLFKSKPRTPADLVRQTRDLLLFSDRSTSLPDLRDSKRDEK-MAELSRNIRDMKSILY 59
Query: 425 G 427
G
Sbjct: 60 G 60
>sp|Q9FGK3|MO2N_ARATH Hypothetical MO25-like protein At5g47540 gi|9758782|dbj|BAB09080.1|
emb|CAB78730.1~gene_id:MNJ7.13~similar to unknown
protein [Arabidopsis thaliana]
gi|16226301|gb|AAL16128.1|AF428296_1 AT5g47540/MNJ7_13
[Arabidopsis thaliana]
Length = 343
Score = 59.7 bits (143), Expect = 8e-09
Identities = 34/61 (55%), Positives = 43/61 (69%), Gaps = 9/61 (14%)
Frame = +2
Query: 272 MKTLFKTKPRTPSEWVRHTRDLLRL---------LQQTKLDDKQMPELNRNIRDIKTILY 424
MK LFK+KPRTP++ VR TRDLL L+ +K D+K M EL+RNIRD+K+ILY
Sbjct: 1 MKGLFKSKPRTPADLVRQTRDLLLFSDRSTSLPDLRDSKRDEK-MAELSRNIRDMKSILY 59
Query: 425 G 427
G
Sbjct: 60 G 60
>dbj|BAC22269.1| putative MO25 protein (CGI-66) [Oryza sativa (japonica
cultivar-group)]
Length = 333
Score = 53.1 bits (126), Expect = 8e-07
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 8/60 (13%)
Frame = +2
Query: 272 MKTLFKTKPRTPSEWVRHTRDLLRLLQ--------QTKLDDKQMPELNRNIRDIKTILYG 427
MK LFK+KPRTP++ VR TR+LL L K ++K M EL++NIR++K+ILYG
Sbjct: 1 MKGLFKSKPRTPADVVRQTRELLIFLDLHSGSRGGDAKREEK-MAELSKNIRELKSILYG 59
>ref|NP_193460.1| putative protein; protein id: At4g17270.1, supported by cDNA:
gi_14190518, supported by cDNA: gi_15810066 [Arabidopsis
thaliana] gi|15214078|sp|Q9M0M4|MO2M_ARATH Hypothetical
MO25-like protein At4g17270 gi|7268479|emb|CAB78730.1|
putative protein [Arabidopsis thaliana]
gi|14190519|gb|AAK55740.1|AF380659_1 AT4g17270/dl4670w
[Arabidopsis thaliana] gi|15810067|gb|AAL06959.1|
AT4g17270/dl4670w [Arabidopsis thaliana]
Length = 343
Score = 53.1 bits (126), Expect = 8e-07
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 9/61 (14%)
Frame = +2
Query: 272 MKTLFKTKPRTPSEWVRHTRDLLRL---------LQQTKLDDKQMPELNRNIRDIKTILY 424
M+ LFK+KPRTP++ VR TRDLL L+++K ++K M EL+++IRD+K ILY
Sbjct: 1 MRGLFKSKPRTPADIVRQTRDLLLYADRSNSFPDLRESKREEK-MVELSKSIRDLKLILY 59
Query: 425 G 427
G
Sbjct: 60 G 60
>ref|NP_178440.1| unknown protein; protein id: At2g03410.1 [Arabidopsis thaliana]
gi|15214084|sp|Q9ZQ77|MO2L_ARATH Hypothetical MO25-like
protein At2g03410 gi|25335968|pir||B84448 hypothetical
protein At2g03410 [imported] - Arabidopsis thaliana
gi|4335758|gb|AAD17435.1| unknown protein [Arabidopsis
thaliana]
Length = 348
Score = 47.8 bits (112), Expect = 3e-05
Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 8/60 (13%)
Frame = +2
Query: 272 MKTLFKTKPRTPSEWVRHTRDLLRLLQQTK-----LDDKQM---PELNRNIRDIKTILYG 427
MK LFK K R P E VR TRDL+ L + + + K++ EL RNIRD+K+ILYG
Sbjct: 1 MKGLFKNKSRLPGEIVRQTRDLIALAESEEEETDARNSKRLGICAELCRNIRDLKSILYG 60
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,849,079
Number of Sequences: 1393205
Number of extensions: 10338910
Number of successful extensions: 46719
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 40657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46385
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 6856422288
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
