Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001523A_C02 KMC001523A_c02
(709 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q42965|NRL4_TOBAC Nitrilase 4 gi|7435979|pir||T03736 nitrilas... 164 1e-39
pir||T03739 nitrilase (EC 3.5.5.1) 4B - common tobacco gi|118161... 160 2e-38
gb|AAM65906.1| Nitrilase 4 (sp P46011) [Arabidopsis thaliana] 152 6e-36
ref|NP_197622.1| Nitrilase 4 (sp P46011); protein id: At5g22300.... 152 6e-36
pir||T52266 nitrilase-like protein [imported] - rice gi|4835588|... 148 6e-35
>sp|Q42965|NRL4_TOBAC Nitrilase 4 gi|7435979|pir||T03736 nitrilase (EC 3.5.5.1) - common
tobacco gi|1171482|dbj|BAA09645.1| nitrilase [Nicotiana
tabacum]
Length = 349
Score = 164 bits (415), Expect = 1e-39
Identities = 85/116 (73%), Positives = 95/116 (81%)
Frame = -3
Query: 707 ASMTHIALEGGCFVLSANQFIRRKDYPPPPEYVFSGTEEDLTPDSVVCVGGSVIISPLAN 528
ASMTHIALEGGCFVLSANQF RRKDYPPPPEYVFSGTEEDLTPDS+VC GGSVIISP
Sbjct: 223 ASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVFSGTEEDLTPDSIVCAGGSVIISPSGA 282
Query: 527 VLAGPNYEGEALISADLDLGEIAQS*APILMWLDTIQGLKLLSLSVKDHPTNPVTF 360
VLAGPNY GEALISADLDLGEIA++ + + ++LSL V+DH +PV+F
Sbjct: 283 VLAGPNYVGEALISADLDLGEIARAKFDFDV-VGHYARPEVLSLIVRDHAVSPVSF 337
>pir||T03739 nitrilase (EC 3.5.5.1) 4B - common tobacco
gi|1181615|dbj|BAA11770.1| nitrilase [Nicotiana tabacum]
Length = 348
Score = 160 bits (405), Expect = 2e-38
Identities = 85/116 (73%), Positives = 95/116 (81%)
Frame = -3
Query: 707 ASMTHIALEGGCFVLSANQFIRRKDYPPPPEYVFSGTEEDLTPDSVVCVGGSVIISPLAN 528
ASMTHIALEGGCFVLSANQF RRKDYPPPPEYVFSGTE DLTPDS+VC GGSVIISP
Sbjct: 223 ASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVFSGTE-DLTPDSIVCAGGSVIISPSGA 281
Query: 527 VLAGPNYEGEALISADLDLGEIAQS*APILMWLDTIQGLKLLSLSVKDHPTNPVTF 360
VLAGPNYEGEALISADLDLGEIA++ + + ++LSL V+DH +PV+F
Sbjct: 282 VLAGPNYEGEALISADLDLGEIARAKFDFDV-VGHYARPEVLSLIVRDHAVSPVSF 336
>gb|AAM65906.1| Nitrilase 4 (sp P46011) [Arabidopsis thaliana]
Length = 346
Score = 152 bits (383), Expect = 6e-36
Identities = 77/116 (66%), Positives = 92/116 (78%)
Frame = -3
Query: 707 ASMTHIALEGGCFVLSANQFIRRKDYPPPPEYVFSGTEEDLTPDSVVCVGGSVIISPLAN 528
ASMTHIALEGGCFVLSANQF RRKDYP PPEY+FSG+EE LTPDSVVC GGS IISPL
Sbjct: 221 ASMTHIALEGGCFVLSANQFCRRKDYPSPPEYMFSGSEESLTPDSVVCAGGSSIISPLGI 280
Query: 527 VLAGPNYEGEALISADLDLGEIAQS*APILMWLDTIQGLKLLSLSVKDHPTNPVTF 360
VLAGPNY GEALI+ADLDLG+IA++ + + ++ SL++++HP V+F
Sbjct: 281 VLAGPNYRGEALITADLDLGDIARAKFDFDV-VGHYSRPEVFSLNIREHPRKAVSF 335
>ref|NP_197622.1| Nitrilase 4 (sp P46011); protein id: At5g22300.1, supported by
cDNA: 6220., supported by cDNA: gi_13937219, supported
by cDNA: gi_508736 [Arabidopsis thaliana]
gi|1171771|sp|P46011|NRL4_ARATH Nitrilase 4
gi|25290268|pir||T52265 nitrilase (EC 3.5.5.1) 4
[imported] - Arabidopsis thaliana
gi|508737|gb|AAA19628.1| nitrilase
gi|9757810|dbj|BAB08328.1| Nitrilase 4 [Arabidopsis
thaliana] gi|13937220|gb|AAK50102.1|AF372965_1
AT5g22300/MWD9_8 [Arabidopsis thaliana]
gi|21700879|gb|AAM70563.1| AT5g22300/MWD9_8 [Arabidopsis
thaliana]
Length = 355
Score = 152 bits (383), Expect = 6e-36
Identities = 77/116 (66%), Positives = 92/116 (78%)
Frame = -3
Query: 707 ASMTHIALEGGCFVLSANQFIRRKDYPPPPEYVFSGTEEDLTPDSVVCVGGSVIISPLAN 528
ASMTHIALEGGCFVLSANQF RRKDYP PPEY+FSG+EE LTPDSVVC GGS IISPL
Sbjct: 230 ASMTHIALEGGCFVLSANQFCRRKDYPSPPEYMFSGSEESLTPDSVVCAGGSSIISPLGI 289
Query: 527 VLAGPNYEGEALISADLDLGEIAQS*APILMWLDTIQGLKLLSLSVKDHPTNPVTF 360
VLAGPNY GEALI+ADLDLG+IA++ + + ++ SL++++HP V+F
Sbjct: 290 VLAGPNYRGEALITADLDLGDIARAKFDFDV-VGHYSRPEVFSLNIREHPRKAVSF 344
>pir||T52266 nitrilase-like protein [imported] - rice gi|4835588|dbj|BAA77679.1|
nitrilase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 362
Score = 148 bits (374), Expect = 6e-35
Identities = 78/116 (67%), Positives = 90/116 (77%)
Frame = -3
Query: 707 ASMTHIALEGGCFVLSANQFIRRKDYPPPPEYVFSGTEEDLTPDSVVCVGGSVIISPLAN 528
ASMTHIALEGGCFVLSANQF RRKDYPPPPEYVF+G E+ +PD+VVC GGSVIISP
Sbjct: 229 ASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVFTGLGEEPSPDTVVCPGGSVIISPSGE 288
Query: 527 VLAGPNYEGEALISADLDLGEIAQS*APILMWLDTIQGLKLLSLSVKDHPTNPVTF 360
VLAGPNYEGEALI+ADLDLGEI ++ + + ++LSL V D P PV+F
Sbjct: 289 VLAGPNYEGEALITADLDLGEIVRAKFDFDV-VGHYARPEVLSLVVNDQPHLPVSF 343
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 645,444,419
Number of Sequences: 1393205
Number of extensions: 14479927
Number of successful extensions: 30848
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 29745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30803
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32373034405
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
