Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001522A_C01 KMC001522A_c01
(566 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172265.1| protein kinase, putative (fragment); protein id... 156 2e-37
ref|NP_195900.1| protein kinase - like; protein id: At5g02800.1 ... 150 1e-35
dbj|BAA94509.1| protein kinase 1 [Populus nigra] 148 4e-35
gb|AAG16628.1| protein serine/threonine kinase BNK1 [Brassica na... 148 5e-35
dbj|BAC16648.1| putative protein serine/threonine kinase [Oryza ... 146 2e-34
>ref|NP_172265.1| protein kinase, putative (fragment); protein id: At1g07870.1,
supported by cDNA: gi_18176233, supported by cDNA:
gi_20465778 [Arabidopsis thaliana]
gi|25287629|pir||B86214 hypothetical protein [imported]
- Arabidopsis thaliana
gi|8439882|gb|AAF75068.1|AC007583_4 Contains similarity
to a protein kinase gb|D88207. It contains an
eukaryotic protein kinase domain PF|00069. ESTs
gb|Z37200 and gb|Z37201 come from this gene.
[Arabidopsis thaliana] gi|18176234|gb|AAL60008.1|
putative protein kinase [Arabidopsis thaliana]
gi|20465779|gb|AAM20378.1| putative protein kinase
[Arabidopsis thaliana]
Length = 423
Score = 156 bits (394), Expect = 2e-37
Identities = 79/123 (64%), Positives = 95/123 (77%)
Frame = -1
Query: 566 ELITARKAIDHTKPAKEQNLVAWPKPLFRDSQKFSQMVDPLLQGQYPKRGLYQALAIAAM 387
ELIT RKAID+TK K+QNLV W +PLF+D + F +MVDPLLQGQYP RGLYQALAI+AM
Sbjct: 299 ELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAM 358
Query: 386 CVQEQPSMRPVVADVVTALNYLASNKYDPLNQHVQTSKNPSPPKDGRDDDDHRHSSSSEH 207
CVQEQP+MRPVV+DVV ALN+LAS+KYDP + + KNPS +D RDD++ R E
Sbjct: 359 CVQEQPTMRPVVSDVVLALNFLASSKYDPNSPSSSSGKNPSFHRD-RDDEEKRPHLVKET 417
Query: 206 NAE 198
E
Sbjct: 418 ECE 420
>ref|NP_195900.1| protein kinase - like; protein id: At5g02800.1 [Arabidopsis
thaliana] gi|11259782|pir||T48301 protein kinase-like -
Arabidopsis thaliana gi|7413555|emb|CAB86034.1| protein
kinase-like [Arabidopsis thaliana]
Length = 395
Score = 150 bits (378), Expect = 1e-35
Identities = 73/110 (66%), Positives = 90/110 (81%), Gaps = 2/110 (1%)
Frame = -1
Query: 566 ELITARKAIDHTKPAKEQNLVAWPKPLFRDSQKFSQMVDPLLQGQYPKRGLYQALAIAAM 387
E+IT RKAID ++ EQNLVAW +PLF+D +KFSQM DP+LQGQYP RGLYQALA+AAM
Sbjct: 269 EIITGRKAIDSSRSTGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAM 328
Query: 386 CVQEQPSMRPVVADVVTALNYLASNKYDPLNQHVQTS--KNPSPPKDGRD 243
CVQEQP++RP++ADVVTAL+YLAS K+DPL Q VQ S +PP+ R+
Sbjct: 329 CVQEQPNLRPLIADVVTALSYLASQKFDPLAQPVQGSLFAPGTPPRSKRE 378
>dbj|BAA94509.1| protein kinase 1 [Populus nigra]
Length = 405
Score = 148 bits (374), Expect = 4e-35
Identities = 76/110 (69%), Positives = 86/110 (78%)
Frame = -1
Query: 566 ELITARKAIDHTKPAKEQNLVAWPKPLFRDSQKFSQMVDPLLQGQYPKRGLYQALAIAAM 387
ELIT RKAID K EQNLVAW +P+F+D + FS MVDPLLQGQYP RGLYQALAIAAM
Sbjct: 294 ELITGRKAIDQRKERGEQNLVAWARPMFKDRRNFSCMVDPLLQGQYPIRGLYQALAIAAM 353
Query: 386 CVQEQPSMRPVVADVVTALNYLASNKYDPLNQHVQTSKNPSPPKDGRDDD 237
CVQEQP+MRP V+D+V ALNYLAS+KYDP VQ S+ SP + G D D
Sbjct: 354 CVQEQPNMRPAVSDLVMALNYLASHKYDPQVHSVQDSRR-SPSRPGLDKD 402
>gb|AAG16628.1| protein serine/threonine kinase BNK1 [Brassica napus]
Length = 376
Score = 148 bits (373), Expect = 5e-35
Identities = 71/109 (65%), Positives = 90/109 (82%), Gaps = 2/109 (1%)
Frame = -1
Query: 566 ELITARKAIDHTKPAKEQNLVAWPKPLFRDSQKFSQMVDPLLQGQYPKRGLYQALAIAAM 387
E+IT RKAID+++ EQNLVAW +PLF+D +KFSQM DP++QGQYP RGLYQALA+AAM
Sbjct: 266 EIITGRKAIDNSRCTGEQNLVAWARPLFKDRRKFSQMADPMIQGQYPPRGLYQALAVAAM 325
Query: 386 CVQEQPSMRPVVADVVTALNYLASNKYDPLNQHVQTS--KNPSPPKDGR 246
CVQEQP++RPV+ADVVTAL YLAS ++DP++Q VQ S +PP+ R
Sbjct: 326 CVQEQPNLRPVIADVVTALTYLASQRFDPMSQPVQGSLFGPGTPPRSKR 374
>dbj|BAC16648.1| putative protein serine/threonine kinase [Oryza sativa (japonica
cultivar-group)]
Length = 477
Score = 146 bits (368), Expect = 2e-34
Identities = 71/105 (67%), Positives = 85/105 (80%), Gaps = 1/105 (0%)
Frame = -1
Query: 566 ELITARKAIDHTKPAKEQNLVAWPKPLFRDSQKFSQMVDPLLQGQYPKRGLYQALAIAAM 387
ELIT RKAIDHT+PA EQNLVAW +PLFRD +KF QM DP LQG YPKRGLYQALA+A+M
Sbjct: 272 ELITGRKAIDHTQPAGEQNLVAWARPLFRDRRKFCQMADPSLQGCYPKRGLYQALAVASM 331
Query: 386 CVQEQPSMRPVVADVVTALNYLASNKYDPLNQHVQTSKN-PSPPK 255
C+QE + RP++AD+VTAL+YLASN YDP ++S+ PS PK
Sbjct: 332 CLQENATSRPLIADIVTALSYLASNHYDPNAPSAKSSRTCPSTPK 376
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,710,349
Number of Sequences: 1393205
Number of extensions: 9903573
Number of successful extensions: 30194
Number of sequences better than 10.0: 680
Number of HSP's better than 10.0 without gapping: 28648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29990
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
