Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001364A_C01 KMC001364A_c01
(684 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175442.1| hypothetical protein; protein id: At1g50240.1 [... 173 2e-42
pir||F96538 hypothetical protein F14I3.15 [imported] - Arabidops... 66 5e-10
emb|CAC07966.1| putative mitogen-activated protein kinase kinase... 59 6e-08
emb|CAB95259.1| probable MAP kinase kinase [Leishmania major] gi... 58 1e-07
ref|NP_197434.1| putative protein; protein id: At5g19330.1 [Arab... 36 0.43
>ref|NP_175442.1| hypothetical protein; protein id: At1g50240.1 [Arabidopsis thaliana]
Length = 1008
Score = 173 bits (438), Expect = 2e-42
Identities = 85/115 (73%), Positives = 106/115 (91%), Gaps = 1/115 (0%)
Frame = -3
Query: 676 AEEDKTKANAAGALSNLVRNSEKLCEDIVSQGAIQSLLKLISDCAVVALNPSRNDSASES 497
AEEDKTKANAAGALSNLVRNS KLCEDIVS+GA+Q+LL+L++DC+ +ALNPS+ ++ASES
Sbjct: 891 AEEDKTKANAAGALSNLVRNSNKLCEDIVSKGALQTLLRLVADCSTLALNPSKKETASES 950
Query: 496 PLKIALFSLAKMCA-HPLCRQFIRSSPLSPVISRLQQSPESSIAKYASIIIGKVS 335
PLKIALFSLAKMC+ H +CRQF++SS L PVI+RL+QSPE++IA YAS+I+ KVS
Sbjct: 951 PLKIALFSLAKMCSNHQICRQFVKSSELFPVIARLKQSPEANIAHYASVIVAKVS 1005
>pir||F96538 hypothetical protein F14I3.15 [imported] - Arabidopsis thaliana
gi|5734778|gb|AAD50043.1|AC007980_8 Hypothetical protein
[Arabidopsis thaliana]
Length = 1097
Score = 65.9 bits (159), Expect = 5e-10
Identities = 32/35 (91%), Positives = 34/35 (96%)
Frame = -3
Query: 676 AEEDKTKANAAGALSNLVRNSEKLCEDIVSQGAIQ 572
AEEDKTKANAAGALSNLVRNS KLCEDIVS+GA+Q
Sbjct: 1044 AEEDKTKANAAGALSNLVRNSNKLCEDIVSKGALQ 1078
>emb|CAC07966.1| putative mitogen-activated protein kinase kinase 2 [Leishmania
mexicana]
Length = 1090
Score = 58.9 bits (141), Expect = 6e-08
Identities = 36/113 (31%), Positives = 58/113 (50%), Gaps = 4/113 (3%)
Frame = -3
Query: 664 KTKANAAGALSNLVRNSEKLCEDIVSQGAIQSLLKLISDCAVVALNPSRNDSASESPLKI 485
KT+ NAAGALSN VRN ++L + ++SLLKL+ D + S K+
Sbjct: 989 KTRQNAAGALSNFVRNGDQLVSSLAESSVVESLLKLL------------RDDDTPSSKKV 1036
Query: 484 ALFSLAKMCAHPLCRQFIRSSPLSPVISRLQQSP----ESSIAKYASIIIGKV 338
A+ ++ CA+ + R+ + L I +LQQ P + SI KY ++ ++
Sbjct: 1037 AVLTINSFCAYDVFRRKFVALELREDIRKLQQDPNARADPSIQKYVGNLVDRL 1089
>emb|CAB95259.1| probable MAP kinase kinase [Leishmania major]
gi|13751123|emb|CAC37137.1| probable mitogen-activated
protein kinase kinase [Leishmania major]
Length = 1090
Score = 58.2 bits (139), Expect = 1e-07
Identities = 36/113 (31%), Positives = 60/113 (52%), Gaps = 4/113 (3%)
Frame = -3
Query: 664 KTKANAAGALSNLVRNSEKLCEDIVSQGAIQSLLKLISDCAVVALNPSRNDSASESPLKI 485
KT+ NAAGALSN VRN ++L + ++SLLK++ D +D+ S K+
Sbjct: 989 KTRQNAAGALSNFVRNGDQLVSSLAESSVVESLLKMLRD----------DDTLSSK--KV 1036
Query: 484 ALFSLAKMCAHPLCRQFIRSSPLSPVISRLQQSP----ESSIAKYASIIIGKV 338
A+ ++ CA+ + R+ + L I +LQQ P + SI KY ++ ++
Sbjct: 1037 AVLTINSFCAYDVFRRKFVALDLREDIRKLQQDPNARTDPSIQKYVGNLVDRL 1089
>ref|NP_197434.1| putative protein; protein id: At5g19330.1 [Arabidopsis thaliana]
Length = 636
Score = 36.2 bits (82), Expect = 0.43
Identities = 26/121 (21%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = -3
Query: 676 AEEDKTKANAAGALSNLVRNSEKLCEDIVSQGAIQSLLKLISDCAVVALNPSRNDSASES 497
+E+ A G + NLV +S + +++++ GA+Q ++ L+S C +S E+
Sbjct: 252 SEDAAIHYEAVGVIGNLVHSSPHIKKEVLTAGALQPVIGLLSSCC--------PESQREA 303
Query: 496 PLKIALFSLAKMCAHPLCR-QFIRSSPLSPVISRLQQSPESSIAKYASIIIGKVS*P*HS 320
L + F+ C+ ++ + P+I L QSP+ + + ++ +G+++ H+
Sbjct: 304 ALLLGQFA----STDSDCKVHIVQRGAVRPLIEML-QSPDVQLKEMSAFALGRLAQDAHN 358
Query: 319 K 317
+
Sbjct: 359 Q 359
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 511,586,954
Number of Sequences: 1393205
Number of extensions: 9850469
Number of successful extensions: 18338
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18335
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30552968016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
