Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001324A_C01 KMC001324A_c01
(625 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564709.1| similar to receptor-like protein kinase, putati... 129 2e-29
pir||G96602 probable receptor protein kinase F14G9.24 [imported]... 129 2e-29
gb|AAF02840.1|AC009894_11 Similar to serine/threonine kinases [A... 129 2e-29
ref|NP_176009.1| receptor-like protein kinase, putative; protein... 128 7e-29
pir||F96602 hypothetical protein T6H22.8.2 [imported] - Arabidop... 128 7e-29
>ref|NP_564709.1| similar to receptor-like protein kinase, putative; protein id:
At1g56140.1 [Arabidopsis thaliana]
Length = 1032
Score = 129 bits (325), Expect = 2e-29
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -3
Query: 623 EKIYLLEWAXQLHEKNSVTDLVDPGLSEFNKEEARRVVGIALLCTQTSPSLRPSMSRVVA 444
EK YLLEWA LHEK +L+D L+EFN EE +R++GIALLCTQTS +LRP MSRVVA
Sbjct: 899 EKRYLLEWAWNLHEKGREVELIDHQLTEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVA 958
Query: 443 MLSGDIEVSTVTSRPGYLTDWKFDDVSS 360
MLSGD+EVS VTS+PGYLTDW+FDD ++
Sbjct: 959 MLSGDVEVSDVTSKPGYLTDWRFDDTTA 986
>pir||G96602 probable receptor protein kinase F14G9.24 [imported] - Arabidopsis
thaliana gi|12321749|gb|AAG50909.1|AC069159_10 receptor
protein kinase, putative [Arabidopsis thaliana]
Length = 2062
Score = 129 bits (325), Expect = 2e-29
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -3
Query: 623 EKIYLLEWAXQLHEKNSVTDLVDPGLSEFNKEEARRVVGIALLCTQTSPSLRPSMSRVVA 444
EK YLLEWA LHEK +L+D L+EFN EE +R++GIALLCTQTS +LRP MSRVVA
Sbjct: 1929 EKRYLLEWAWNLHEKGREVELIDHQLTEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVA 1988
Query: 443 MLSGDIEVSTVTSRPGYLTDWKFDDVSS 360
MLSGD+EVS VTS+PGYLTDW+FDD ++
Sbjct: 1989 MLSGDVEVSDVTSKPGYLTDWRFDDTTA 2016
Score = 110 bits (274), Expect = 2e-23
Identities = 52/118 (44%), Positives = 80/118 (67%)
Frame = -3
Query: 623 EKIYLLEWAXQLHEKNSVTDLVDPGLSEFNKEEARRVVGIALLCTQTSPSLRPSMSRVVA 444
+K YLLEWA LH++ ++VDP L+EF+KEE +RV+G+A LCTQT ++RP+MSRVV
Sbjct: 868 DKQYLLEWAWSLHQEQRDMEVVDPDLTEFDKEEVKRVIGVAFLCTQTDHAIRPTMSRVVG 927
Query: 443 MLSGDIEVSTVTSRPGYLTDWKFDDVSSFMTDITTKATDGSYYNSTASTSMVGGADHS 270
ML+GD+E++ ++PGY+++ F++ SFM+ T+ + +S S G D S
Sbjct: 928 MLTGDVEITEANAKPGYVSERTFENAMSFMSGSTSSSWILPETPKDSSKSQSKGGDAS 985
>gb|AAF02840.1|AC009894_11 Similar to serine/threonine kinases [Arabidopsis thaliana]
Length = 1086
Score = 129 bits (325), Expect = 2e-29
Identities = 61/88 (69%), Positives = 73/88 (82%)
Frame = -3
Query: 623 EKIYLLEWAXQLHEKNSVTDLVDPGLSEFNKEEARRVVGIALLCTQTSPSLRPSMSRVVA 444
EK YLLEWA LHEK +L+D L+EFN EE +R++GIALLCTQTS +LRP MSRVVA
Sbjct: 953 EKRYLLEWAWNLHEKGREVELIDHQLTEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVA 1012
Query: 443 MLSGDIEVSTVTSRPGYLTDWKFDDVSS 360
MLSGD+EVS VTS+PGYLTDW+FDD ++
Sbjct: 1013 MLSGDVEVSDVTSKPGYLTDWRFDDTTA 1040
>ref|NP_176009.1| receptor-like protein kinase, putative; protein id: At1g56130.1
[Arabidopsis thaliana]
Length = 1032
Score = 128 bits (321), Expect = 7e-29
Identities = 68/135 (50%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Frame = -3
Query: 623 EKIYLLEWAXQLHEKNSVTDLVDPGLSEFNKEEARRVVGIALLCTQTSPSLRPSMSRVVA 444
EK YLLEWA LHEK+ +L+D L++FN EEA+R++GIALLCTQTS +LRP MSRVVA
Sbjct: 901 EKKYLLEWAWNLHEKSRDIELIDDKLTDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVA 960
Query: 443 MLSGDIEVSTVTSRPGYLTDWKFDDVS-SFMTDITTKATDGSYYNSTASTSMVGGADHSP 267
MLSGD+E+ VTS+PGY++DW+FDD + S ++ K T G + A S + D
Sbjct: 961 MLSGDVEIGDVTSKPGYVSDWRFDDTTGSSLSGFQIKDTTGYSMSLVAPGSEISPRDS-- 1018
Query: 266 IDPSTAILHDLNDGR 222
D + +N+GR
Sbjct: 1019 -DFKPMLGSKINEGR 1032
>pir||F96602 hypothetical protein T6H22.8.2 [imported] - Arabidopsis thaliana
gi|6056374|gb|AAF02838.1|AC009894_9 Similar to
serine/threonine kinases [Arabidopsis thaliana]
Length = 1029
Score = 128 bits (321), Expect = 7e-29
Identities = 68/135 (50%), Positives = 91/135 (67%), Gaps = 1/135 (0%)
Frame = -3
Query: 623 EKIYLLEWAXQLHEKNSVTDLVDPGLSEFNKEEARRVVGIALLCTQTSPSLRPSMSRVVA 444
EK YLLEWA LHEK+ +L+D L++FN EEA+R++GIALLCTQTS +LRP MSRVVA
Sbjct: 898 EKKYLLEWAWNLHEKSRDIELIDDKLTDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVA 957
Query: 443 MLSGDIEVSTVTSRPGYLTDWKFDDVS-SFMTDITTKATDGSYYNSTASTSMVGGADHSP 267
MLSGD+E+ VTS+PGY++DW+FDD + S ++ K T G + A S + D
Sbjct: 958 MLSGDVEIGDVTSKPGYVSDWRFDDTTGSSLSGFQIKDTTGYSMSLVAPGSEISPRDS-- 1015
Query: 266 IDPSTAILHDLNDGR 222
D + +N+GR
Sbjct: 1016 -DFKPMLGSKINEGR 1029
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 526,909,976
Number of Sequences: 1393205
Number of extensions: 10837066
Number of successful extensions: 38624
Number of sequences better than 10.0: 841
Number of HSP's better than 10.0 without gapping: 37488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38487
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25301904073
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
