Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001311A_C01 KMC001311A_c01
(547 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB67319.1| glutathione S-conjugate transporting ATPase [Arab... 87 2e-16
ref|NP_174329.1| glutathione S-conjugate ABC transporter (AtMRP1... 87 2e-16
gb|AAL90919.1| At1g30400/T4K22_12 [Arabidopsis thaliana] 87 2e-16
emb|CAD59448.1| MRP-like ABC transporter [Oryza sativa (japonica... 85 5e-16
gb|AAC04246.1| MgATP-energized glutathione S-conjugate pump [Ara... 80 1e-14
>gb|AAB67319.1| glutathione S-conjugate transporting ATPase [Arabidopsis thaliana]
gi|2459949|gb|AAB71832.1| multidrug resistance-associated
protein homolog [Arabidopsis thaliana]
Length = 1622
Score = 86.7 bits (213), Expect = 2e-16
Identities = 39/89 (43%), Positives = 62/89 (68%)
Frame = -1
Query: 547 SVHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIEETLTKFHVPTYRWWSTLHQ 368
S HN+LQ +++ L +TKDAV TL+ VLEGKHD+ IE++L + + RWW +L++
Sbjct: 1528 SSHNDLQSLEIEDDNSILKKTKDAVVTLRSVLEGKHDKEIEDSLNQSDISRERWWPSLYK 1587
Query: 367 VIEGLAILIRLPPDNIQQLEPDFEGRSFD 281
++EGLA++ RL + +Q + + EG+SFD
Sbjct: 1588 MVEGLAVMSRLARNRMQHPDYNLEGKSFD 1616
>ref|NP_174329.1| glutathione S-conjugate ABC transporter (AtMRP1); protein id:
At1g30400.1, supported by cDNA: gi_2340165 [Arabidopsis
thaliana] gi|25297467|pir||D86428 glutathione S-conjugate
transporting ATPase (AtMRP1) - Arabidopsis thaliana
gi|12322122|gb|AAG51096.1|AC025295_4 glutathione
S-conjugate transporting ATPase (AtMRP1) [Arabidopsis
thaliana]
Length = 1622
Score = 86.7 bits (213), Expect = 2e-16
Identities = 39/89 (43%), Positives = 62/89 (68%)
Frame = -1
Query: 547 SVHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIEETLTKFHVPTYRWWSTLHQ 368
S HN+LQ +++ L +TKDAV TL+ VLEGKHD+ IE++L + + RWW +L++
Sbjct: 1528 SSHNDLQSLEIEDDNSILKKTKDAVVTLRSVLEGKHDKEIEDSLNQSDISRERWWPSLYK 1587
Query: 367 VIEGLAILIRLPPDNIQQLEPDFEGRSFD 281
++EGLA++ RL + +Q + + EG+SFD
Sbjct: 1588 MVEGLAVMSRLARNRMQHPDYNLEGKSFD 1616
>gb|AAL90919.1| At1g30400/T4K22_12 [Arabidopsis thaliana]
Length = 787
Score = 86.7 bits (213), Expect = 2e-16
Identities = 39/89 (43%), Positives = 62/89 (68%)
Frame = -1
Query: 547 SVHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIEETLTKFHVPTYRWWSTLHQ 368
S HN+LQ +++ L +TKDAV TL+ VLEGKHD+ IE++L + + RWW +L++
Sbjct: 693 SSHNDLQSLEIEDDNSILKKTKDAVVTLRSVLEGKHDKEIEDSLNQSDISRERWWPSLYK 752
Query: 367 VIEGLAILIRLPPDNIQQLEPDFEGRSFD 281
++EGLA++ RL + +Q + + EG+SFD
Sbjct: 753 MVEGLAVMSRLARNRMQHPDYNLEGKSFD 781
>emb|CAD59448.1| MRP-like ABC transporter [Oryza sativa (japonica cultivar-group)]
Length = 1627
Score = 85.1 bits (209), Expect = 5e-16
Identities = 41/87 (47%), Positives = 61/87 (69%)
Frame = -1
Query: 547 SVHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIEETLTKFHVPTYRWWSTLHQ 368
S H++L + E + L +TKDAV TLQ VLEGKH+ I++TL ++ VP+ RWWS+L++
Sbjct: 1535 SSHSDLLALEAAEGNNILRKTKDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYK 1594
Query: 367 VIEGLAILIRLPPDNIQQLEPDFEGRS 287
V+EGLA++ RL + +QQ +FE S
Sbjct: 1595 VMEGLAMMSRLGRNRLQQPSYNFENNS 1621
>gb|AAC04246.1| MgATP-energized glutathione S-conjugate pump [Arabidopsis thaliana]
Length = 1622
Score = 80.5 bits (197), Expect = 1e-14
Identities = 38/89 (42%), Positives = 60/89 (66%)
Frame = -1
Query: 547 SVHNNLQKPSSKENKDFLDETKDAVTTLQEVLEGKHDEAIEETLTKFHVPTYRWWSTLHQ 368
S HN+LQ +++ L T DAV TL+ VLEGKHD+ I E+L + ++ W S+L++
Sbjct: 1528 SSHNDLQSLEIEDDSSILKRTNDAVVTLRSVLEGKHDKEIAESLEEHNISREGWLSSLYR 1587
Query: 367 VIEGLAILIRLPPDNIQQLEPDFEGRSFD 281
++EGLA++ RL + +QQ + +FEG +FD
Sbjct: 1588 MVEGLAVMSRLARNRMQQPDYNFEGNTFD 1616
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 445,480,493
Number of Sequences: 1393205
Number of extensions: 9164001
Number of successful extensions: 24612
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24508
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
