Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001290A_C01 KMC001290A_c01
(652 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178746.1| unknown protein; protein id: At2g07360.1 [Arabi... 108 6e-23
gb|EAA36129.1| hypothetical protein [Neurospora crassa] 37 0.18
pir||T50995 related to cytoskeleton assembly control protein SLA... 37 0.18
emb|CAB97315.2| related to cytoskeleton assembly control protein... 37 0.18
ref|NP_611251.1| CG10933-PA [Drosophila melanogaster] gi|7302730... 37 0.23
>ref|NP_178746.1| unknown protein; protein id: At2g07360.1 [Arabidopsis thaliana]
gi|25411294|pir||H84484 hypothetical protein At2g07360
[imported] - Arabidopsis thaliana
gi|4309759|gb|AAD15528.1| unknown protein [Arabidopsis
thaliana]
Length = 498
Score = 108 bits (270), Expect = 6e-23
Identities = 50/54 (92%), Positives = 53/54 (97%)
Frame = -3
Query: 650 YDFTAGGDDELSLTAGEEVEIEYEVDGWFYVKKKRPGRDGKMAGLVPVLYVNQA 489
YDFTAGGDDEL+LTA EE+EIEYEVDGWFYVKKKRPGRDGKMAGLVPVLYVNQ+
Sbjct: 445 YDFTAGGDDELNLTAEEELEIEYEVDGWFYVKKKRPGRDGKMAGLVPVLYVNQS 498
>gb|EAA36129.1| hypothetical protein [Neurospora crassa]
Length = 1183
Score = 37.4 bits (85), Expect = 0.18
Identities = 19/53 (35%), Positives = 34/53 (63%), Gaps = 2/53 (3%)
Frame = -3
Query: 650 YDFTAGGDDELSLTAGEEVEI--EYEVDGWFYVKKKRPGRDGKMAGLVPVLYV 498
YDF A G+DE+++ G+EV I + + D W+ V++ + G++ G+VP Y+
Sbjct: 400 YDFMAQGEDEVTVGVGDEVVILDDTKSDEWWMVRRVKNGKE----GVVPSSYI 448
Score = 35.8 bits (81), Expect = 0.51
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 650 YDFTAGGDDELSLTAGE---EVEIEYEVDGWFYVKKKRPGRDGKMAGLVPVLYVNQA 489
YD+T G+ EL+++ G+ +E E D W KK D + GL+P Y+ +A
Sbjct: 11 YDYTPQGEGELTISEGDILYVLEKSQEDDWWKAKKKANAADDDEPVGLIPNNYIEEA 67
>pir||T50995 related to cytoskeleton assembly control protein SLA1 [imported] -
Neurospora crassa
Length = 1119
Score = 37.4 bits (85), Expect = 0.18
Identities = 19/53 (35%), Positives = 34/53 (63%), Gaps = 2/53 (3%)
Frame = -3
Query: 650 YDFTAGGDDELSLTAGEEVEI--EYEVDGWFYVKKKRPGRDGKMAGLVPVLYV 498
YDF A G+DE+++ G+EV I + + D W+ V++ + G++ G+VP Y+
Sbjct: 359 YDFMAQGEDEVTVGVGDEVVILDDTKSDEWWMVRRVKNGKE----GVVPSSYI 407
Score = 35.8 bits (81), Expect = 0.51
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 650 YDFTAGGDDELSLTAGE---EVEIEYEVDGWFYVKKKRPGRDGKMAGLVPVLYVNQA 489
YD+T G+ EL+++ G+ +E E D W KK D + GL+P Y+ +A
Sbjct: 11 YDYTPQGEGELTISEGDILYVLEKSQEDDWWKAKKKANAADDDEPVGLIPNNYIEEA 67
>emb|CAB97315.2| related to cytoskeleton assembly control protein SLA1 [Neurospora
crassa]
Length = 1130
Score = 37.4 bits (85), Expect = 0.18
Identities = 19/53 (35%), Positives = 34/53 (63%), Gaps = 2/53 (3%)
Frame = -3
Query: 650 YDFTAGGDDELSLTAGEEVEI--EYEVDGWFYVKKKRPGRDGKMAGLVPVLYV 498
YDF A G+DE+++ G+EV I + + D W+ V++ + G++ G+VP Y+
Sbjct: 359 YDFMAQGEDEVTVGVGDEVVILDDTKSDEWWMVRRVKNGKE----GVVPSSYI 407
Score = 35.8 bits (81), Expect = 0.51
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 650 YDFTAGGDDELSLTAGE---EVEIEYEVDGWFYVKKKRPGRDGKMAGLVPVLYVNQA 489
YD+T G+ EL+++ G+ +E E D W KK D + GL+P Y+ +A
Sbjct: 11 YDYTPQGEGELTISEGDILYVLEKSQEDDWWKAKKKANAADDDEPVGLIPNNYIEEA 67
>ref|NP_611251.1| CG10933-PA [Drosophila melanogaster] gi|7302730|gb|AAF57808.1|
CG10933-PA [Drosophila melanogaster]
Length = 347
Score = 37.0 bits (84), Expect = 0.23
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -3
Query: 650 YDFTAGGDDELSLTAGEEVEIEYEVDGWFYVKKKRPGRDGKMAGLVPVLY 501
+DFT DDEL + G+ V I Y + W YV G+D + G +P Y
Sbjct: 58 HDFTPCVDDELEVKRGQLVNILYRENDWVYV----IGQDSRQEGFIPFSY 103
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 515,146,967
Number of Sequences: 1393205
Number of extensions: 10660338
Number of successful extensions: 27900
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 26372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27857
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
