Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001272A_C01 KMC001272A_c01
(585 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB55429.1| C2H2 zinc finger transcription factor [Drosophil... 46 4e-04
ref|NP_727360.1| CG1343-PB [Drosophila melanogaster] gi|22833043... 44 0.001
ref|NP_572579.2| CG1343-PA [Drosophila melanogaster] gi|22833042... 44 0.001
gb|AAO67562.1| Pol protein [Drosophila virilis] 44 0.002
gb|EAA16908.1| Drosophila melanogaster CG8797 gene product-relat... 43 0.003
>emb|CAB55429.1| C2H2 zinc finger transcription factor [Drosophila melanogaster]
Length = 523
Score = 45.8 bits (107), Expect = 4e-04
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKA 387
+Q+ QQ QHQ Q QQ+H Q Q H Q+++Q QQ QH+++ Q+Q+ A
Sbjct: 434 QQQQQQQQQQQQQHQQQQQQQHQQQQQQHQQQQQQHHQQQQQHHHQQFGQQQHPHA 489
Score = 39.7 bits (91), Expect = 0.028
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQ 405
G ++QQ QHQ Q QQ+ Q Q H Q+++Q QQ Q + + Q Q
Sbjct: 418 GSPVMLHQQQQQQQHQQQQQQQQQQQQQQHQQQQQQQHQQQQQQHQQQQQQ 468
Score = 39.3 bits (90), Expect = 0.037
Identities = 19/48 (39%), Positives = 27/48 (55%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQ 411
+Q+ +QQ Q Q Q QQ Q Q H Q+++Q Q QQ QH+ + Q
Sbjct: 427 QQQQQHQQQQQQQQQQQQQQHQQQQQQQHQQQQQQHQQQQQQHHQQQQ 474
Score = 34.3 bits (77), Expect = 1.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 515 HQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQR 402
HQ Q QQ+H Q Q Q+++Q QQ Q ++ Q Q+
Sbjct: 424 HQQQQQQQHQQQQQQQQQQQQQQHQQQQQQQHQQQQQQ 461
Score = 32.0 bits (71), Expect = 5.9
Identities = 16/43 (37%), Positives = 19/43 (43%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQH 426
+Q+ Q QHQ Q QQ H Q Q H Q+ Q Q H
Sbjct: 449 QQQQQQHQQQQQQHQQQQQQHHQQQQQHHHQQFGQQQHPHAHH 491
>ref|NP_727360.1| CG1343-PB [Drosophila melanogaster] gi|22833043|gb|AAN09612.1|
CG1343-PB [Drosophila melanogaster]
Length = 520
Score = 44.3 bits (103), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = -2
Query: 536 QQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKA 387
QQ QHQ Q QQ+H Q Q H Q+++Q QQ QH+++ Q+Q+ A
Sbjct: 437 QQQQQQQHQQQQQQQHQQQQQQHQQQQQQHHQQQQQHHHQQFGQQQHPHA 486
Score = 39.3 bits (90), Expect = 0.037
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 569 SSLMGEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQ 411
S +M Q+ QQ Q Q Q QQ Q Q H Q+++Q Q QQ QH+ + Q
Sbjct: 419 SPVMLHQQQQQQQHQQQQQQQQQQQHQQQQQQQHQQQQQQHQQQQQQHHQQQQ 471
Score = 35.0 bits (79), Expect = 0.69
Identities = 17/39 (43%), Positives = 22/39 (55%)
Frame = -2
Query: 515 HQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQ 399
HQ Q QQ+H Q Q Q++ Q Q QQ QH + Q +Q
Sbjct: 424 HQQQQQQQHQQQQQQQQQQQHQQQQQQ-QHQQQQQQHQQ 461
Score = 33.5 bits (75), Expect = 2.0
Identities = 17/40 (42%), Positives = 24/40 (59%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQ 435
+Q+ +QQ QHQ Q QQ+H Q Q H Q+++Q QQ
Sbjct: 439 QQQQQHQQQQQQQHQQQ-QQQHQQQQQQHHQQQQQHHHQQ 477
Score = 32.0 bits (71), Expect = 5.9
Identities = 16/43 (37%), Positives = 19/43 (43%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQH 426
+Q+ Q QHQ Q QQ H Q Q H Q+ Q Q H
Sbjct: 446 QQQQQQHQQQQQQHQQQQQQHHQQQQQHHHQQFGQQQHPHAHH 488
>ref|NP_572579.2| CG1343-PA [Drosophila melanogaster] gi|22833042|gb|AAF46519.2|
CG1343-PA [Drosophila melanogaster]
Length = 691
Score = 44.3 bits (103), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = -2
Query: 536 QQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKA 387
QQ QHQ Q QQ+H Q Q H Q+++Q QQ QH+++ Q+Q+ A
Sbjct: 608 QQQQQQQHQQQQQQQHQQQQQQHQQQQQQHHQQQQQHHHQQFGQQQHPHA 657
Score = 39.3 bits (90), Expect = 0.037
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 569 SSLMGEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQ 411
S +M Q+ QQ Q Q Q QQ Q Q H Q+++Q Q QQ QH+ + Q
Sbjct: 590 SPVMLHQQQQQQQHQQQQQQQQQQQHQQQQQQQHQQQQQQHQQQQQQHHQQQQ 642
Score = 35.0 bits (79), Expect = 0.69
Identities = 17/39 (43%), Positives = 22/39 (55%)
Frame = -2
Query: 515 HQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQ 399
HQ Q QQ+H Q Q Q++ Q Q QQ QH + Q +Q
Sbjct: 595 HQQQQQQQHQQQQQQQQQQQHQQQQQQ-QHQQQQQQHQQ 632
Score = 33.5 bits (75), Expect = 2.0
Identities = 17/40 (42%), Positives = 24/40 (59%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQ 435
+Q+ +QQ QHQ Q QQ+H Q Q H Q+++Q QQ
Sbjct: 610 QQQQQHQQQQQQQHQQQ-QQQHQQQQQQHHQQQQQHHHQQ 648
Score = 32.0 bits (71), Expect = 5.9
Identities = 16/43 (37%), Positives = 19/43 (43%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQH 426
+Q+ Q QHQ Q QQ H Q Q H Q+ Q Q H
Sbjct: 617 QQQQQQHQQQQQQHQQQQQQHHQQQQQHHHQQFGQQQHPHAHH 659
>gb|AAO67562.1| Pol protein [Drosophila virilis]
Length = 1330
Score = 43.5 bits (101), Expect = 0.002
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQ 399
+Q+ QQ Q Q Q QQ+H Q Q Q+E+Q Q QQ QH + Q Q+Q
Sbjct: 924 QQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQEQQQQQQQQQHQYQQQHQQQ 975
>gb|EAA16908.1| Drosophila melanogaster CG8797 gene product-related [Plasmodium
yoelii yoelii]
Length = 2198
Score = 43.1 bits (100), Expect = 0.003
Identities = 22/63 (34%), Positives = 33/63 (51%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKATAY 378
G+Q+A QQ H Q Q GQQ+ Q +H Q++ Q QQ Q + Q Q+ +G+ +
Sbjct: 1019 GQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQQQQQQQQQQQQQGHGQQQGH 1078
Query: 377 *SQ 369
Q
Sbjct: 1079 GQQ 1081
Score = 42.7 bits (99), Expect = 0.003
Identities = 22/63 (34%), Positives = 33/63 (51%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKATAY 378
G+Q+A QQ H Q Q GQQ+ Q +H Q+++Q Q QQ Q Q+ +G+ +
Sbjct: 1025 GQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQQQQQQQQQQQQQGHGQQQGHGQQQGH 1084
Query: 377 *SQ 369
Q
Sbjct: 1085 GQQ 1087
Score = 40.4 bits (93), Expect = 0.016
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQE----ERQTQSQQIQHNNEFQSQRQNG 393
G+Q+A QQ H Q Q GQQ+ Q +H Q+ ++Q QQ Q + Q Q+Q G
Sbjct: 1013 GQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQQQQQQQQQQQQQG 1071
Score = 38.9 bits (89), Expect = 0.048
Identities = 21/57 (36%), Positives = 30/57 (51%), Gaps = 4/57 (7%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQE----ERQTQSQQIQHNNEFQSQRQ 399
G+Q+A QQ H Q Q GQQ+ Q +H Q+ ++Q QQ H + Q Q+Q
Sbjct: 1007 GQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQQQQQQ 1063
Score = 37.0 bits (84), Expect = 0.18
Identities = 20/63 (31%), Positives = 30/63 (46%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKATAY 378
G+Q+A QQ H Q Q GQQ+ Q +H Q++ Q Q Q+ +G+ A+
Sbjct: 989 GQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAH 1048
Query: 377 *SQ 369
Q
Sbjct: 1049 GQQ 1051
Score = 37.0 bits (84), Expect = 0.18
Identities = 20/63 (31%), Positives = 30/63 (46%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKATAY 378
G+Q+A QQ H Q Q GQQ+ Q +H Q++ Q Q Q+ +G+ A+
Sbjct: 995 GQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAH 1054
Query: 377 *SQ 369
Q
Sbjct: 1055 GQQ 1057
Score = 37.0 bits (84), Expect = 0.18
Identities = 20/63 (31%), Positives = 30/63 (46%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKATAY 378
G+Q+A QQ H Q Q GQQ+ Q +H Q++ Q Q Q+ +G+ A+
Sbjct: 983 GQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAH 1042
Query: 377 *SQ 369
Q
Sbjct: 1043 GQQ 1045
Score = 35.4 bits (80), Expect = 0.53
Identities = 19/63 (30%), Positives = 29/63 (45%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKATAY 378
G+Q+ QQ H Q Q GQQ+ Q +H Q++ Q Q Q+ +G+ A+
Sbjct: 977 GQQQGHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAH 1036
Query: 377 *SQ 369
Q
Sbjct: 1037 GQQ 1039
Score = 35.4 bits (80), Expect = 0.53
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNG 393
G+Q+ QQ H QHQ Q+ H Q Q H Q++ Q Q Q Q Q Q G
Sbjct: 1260 GQQQGHGQQQGHGQHQ---QEAHRQHQQGHGQQQGQGQQGQGQGQQGAHVQHQQG 1311
Score = 34.7 bits (78), Expect = 0.90
Identities = 21/49 (42%), Positives = 27/49 (54%)
Frame = -2
Query: 536 QQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGK 390
QQ H+QHQ Q+ H Q Q H Q++ Q Q QQ Q + Q Q Q G+
Sbjct: 1209 QQGAHVQHQ---QEAHRQHQQGHGQQQGQGQ-QQGQGQQQGQGQGQQGQ 1253
Score = 33.5 bits (75), Expect = 2.0
Identities = 19/56 (33%), Positives = 27/56 (47%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGK 390
G+Q+ QQ Q Q QGQQ Q Q Q +++ Q Q + + Q Q Q G+
Sbjct: 1085 GQQQGQGQQQGQQQGQGQGQQGQGQGQQGQGQGQQEAHRQHQQGHGQQQGQGQQGQ 1140
Score = 33.1 bits (74), Expect = 2.6
Identities = 20/56 (35%), Positives = 28/56 (49%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGK 390
G+Q+ QQ Q Q GQQ+ Q H Q++ Q Q QQ Q + Q Q+ G+
Sbjct: 1055 GQQQQQQQQQQQQQQQGHGQQQGHGQQQGHGQQQGQGQ-QQGQQQGQGQGQQGQGQ 1109
Score = 32.7 bits (73), Expect = 3.4
Identities = 21/59 (35%), Positives = 28/59 (46%), Gaps = 3/59 (5%)
Frame = -2
Query: 557 GEQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQ---QIQHNNEFQSQRQNGK 390
G+Q+A QQ Q Q Q QQ+ Q H Q++ Q Q Q Q + Q Q Q G+
Sbjct: 1049 GQQQAHGQQQQQQQQQQQQQQQGHGQQQGHGQQQGHGQQQGQGQQQGQQQGQGQGQQGQ 1107
Score = 32.3 bits (72), Expect = 4.5
Identities = 17/52 (32%), Positives = 26/52 (49%)
Frame = -2
Query: 554 EQRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQ 399
+Q+ QQ+ Q Q Q + + +Q Q Q+E Q QQ Q + Q Q+Q
Sbjct: 711 QQQQQQQQLQQQQQQQQQEVQQIQQQQQQQQQEVQQIQQQQQQQQQQQQQQQ 762
Score = 31.2 bits (69), Expect = 10.0
Identities = 18/61 (29%), Positives = 27/61 (43%)
Frame = -2
Query: 551 QRAINQQMVHLQHQPQGQQRHLQLQNSHSQEERQTQSQQIQHNNEFQSQRQNGKATAY*S 372
Q+ QQ H Q Q GQQ+ Q +H Q++ Q Q Q+ +G+ A+
Sbjct: 973 QQGQGQQQGHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQQQAHGQ 1032
Query: 371 Q 369
Q
Sbjct: 1033 Q 1033
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 465,509,758
Number of Sequences: 1393205
Number of extensions: 9463818
Number of successful extensions: 30430
Number of sequences better than 10.0: 637
Number of HSP's better than 10.0 without gapping: 25534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29568
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
