Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001256A_C01 KMC001256A_c01
(646 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01516|ALFC_PEA FRUCTOSE-BISPHOSPHATE ALDOLASE 1, CHLOROPLAST... 222 4e-57
gb|AAM46780.1|AF467803_1 latex plastidic aldolase-like protein [... 214 6e-55
dbj|BAA77603.1| plastidic aldolase [Nicotiana paniculata] 210 1e-53
dbj|BAA77604.1| plastidic aldolase NPALDP1 [Nicotiana paniculata] 210 1e-53
gb|AAA33643.1| aldolase 208 6e-53
>sp|Q01516|ALFC_PEA FRUCTOSE-BISPHOSPHATE ALDOLASE 1, CHLOROPLAST PRECURSOR
gi|322710|pir||S29047 fructose-bisphosphate aldolase (EC
4.1.2.13) precursor, chloroplast - garden pea (fragment)
gi|169037|gb|AAA33642.1| aldolase
Length = 356
Score = 222 bits (565), Expect = 4e-57
Identities = 110/126 (87%), Positives = 116/126 (91%)
Frame = -3
Query: 644 PGAESKDKVSPQTVSDYTLKLLKRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWH 465
PGAESKDK SP V++YTL LL RRIPPAVPGIMFLSGGQSEVEATLNLNAMN+SPNPWH
Sbjct: 231 PGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWH 290
Query: 464 VSFSFARALPNTALKTWGGRAENVKAAPDALLFRAKSNSLAQLGKYNGDGESEEAQKELF 285
VSFS+ARAL NTALKTWGG ENVKAA +ALLFRAKSNSLAQLGKY GDGESEEA+KELF
Sbjct: 291 VSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYYGDGESEEAKKELF 350
Query: 284 VKGYSY 267
VKGYSY
Sbjct: 351 VKGYSY 356
>gb|AAM46780.1|AF467803_1 latex plastidic aldolase-like protein [Hevea brasiliensis]
Length = 396
Score = 214 bits (546), Expect = 6e-55
Identities = 104/126 (82%), Positives = 112/126 (88%)
Frame = -3
Query: 644 PGAESKDKVSPQTVSDYTLKLLKRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWH 465
PGAE KDK +PQ VSDYTLKLLKRRIPPA+PGIMFLSGGQSEVEATLNLNAMNQ PNPWH
Sbjct: 271 PGAECKDKATPQQVSDYTLKLLKRRIPPAIPGIMFLSGGQSEVEATLNLNAMNQGPNPWH 330
Query: 464 VSFSFARALPNTALKTWGGRAENVKAAPDALLFRAKSNSLAQLGKYNGDGESEEAQKELF 285
VSFS+ARAL NT LKTW GR ENVKAA + LL RAK+NSLAQLGKY G+GESEEA+K +F
Sbjct: 331 VSFSYARALQNTCLKTWAGRPENVKAAQEVLLVRAKANSLAQLGKYTGEGESEEAKKGMF 390
Query: 284 VKGYSY 267
VKGY Y
Sbjct: 391 VKGYVY 396
>dbj|BAA77603.1| plastidic aldolase [Nicotiana paniculata]
Length = 398
Score = 210 bits (535), Expect = 1e-53
Identities = 101/126 (80%), Positives = 114/126 (90%)
Frame = -3
Query: 644 PGAESKDKVSPQTVSDYTLKLLKRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWH 465
PGAE KD+ +PQ V+DYTL LL+RRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ+PNPWH
Sbjct: 273 PGAECKDRATPQQVADYTLSLLQRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWH 332
Query: 464 VSFSFARALPNTALKTWGGRAENVKAAPDALLFRAKSNSLAQLGKYNGDGESEEAQKELF 285
VSFS+ARAL NT LKTWGG+ ENVKAA DALL RAK+NSLAQLGKY G+GES+EA++ +F
Sbjct: 333 VSFSYARALQNTCLKTWGGQPENVKAAQDALLTRAKANSLAQLGKYTGEGESDEAKQGMF 392
Query: 284 VKGYSY 267
VKGY Y
Sbjct: 393 VKGYVY 398
>dbj|BAA77604.1| plastidic aldolase NPALDP1 [Nicotiana paniculata]
Length = 395
Score = 210 bits (534), Expect = 1e-53
Identities = 101/126 (80%), Positives = 113/126 (89%)
Frame = -3
Query: 644 PGAESKDKVSPQTVSDYTLKLLKRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWH 465
PGAE K++ +P V+DYTLKLL+RRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWH
Sbjct: 270 PGAECKERATPDQVADYTLKLLQRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWH 329
Query: 464 VSFSFARALPNTALKTWGGRAENVKAAPDALLFRAKSNSLAQLGKYNGDGESEEAQKELF 285
VSFS+ARAL NT LKTWGGR ENV+AA +ALL RA +NSLAQLGKY G+GESEEA+K +F
Sbjct: 330 VSFSYARALQNTCLKTWGGRPENVQAAQEALLIRANANSLAQLGKYTGEGESEEAKKGMF 389
Query: 284 VKGYSY 267
VKGY Y
Sbjct: 390 VKGYVY 395
>gb|AAA33643.1| aldolase
Length = 348
Score = 208 bits (529), Expect = 6e-53
Identities = 105/126 (83%), Positives = 113/126 (89%)
Frame = -3
Query: 644 PGAESKDKVSPQTVSDYTLKLLKRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWH 465
PGAESKDK SP V++YTL LL RRIPPAVPGIMFLSGGQSEVEATLNLNAMN+SPNPWH
Sbjct: 224 PGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWH 283
Query: 464 VSFSFARALPNTALKTWGGRAENVKAAPDALLFRAKSNSLAQLGKYNGDGESEEAQKELF 285
VSFS+ARAL NTALKTWGG ENVKAA +ALLFRAKSNSLAQLGKY GDGESEEA+K+
Sbjct: 284 VSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKDC- 342
Query: 284 VKGYSY 267
+GYSY
Sbjct: 343 CQGYSY 348
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 598,412,795
Number of Sequences: 1393205
Number of extensions: 13696123
Number of successful extensions: 33848
Number of sequences better than 10.0: 218
Number of HSP's better than 10.0 without gapping: 32437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33574
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
