Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001169A_C01 KMC001169A_c01
(510 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06242 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge... 177 5e-44
ref|NP_174408.1| putative aspartate kinase-homoserine dehydrogen... 163 9e-40
pir||S46497 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge... 163 9e-40
pir||T06246 aspartate kinase (EC 2.7.2.4) / homoserine dehydroge... 162 2e-39
dbj|BAC43372.1| putative aspartate kinase-homoserine dehydrogena... 162 3e-39
>pir||T06242 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC 1.1.1.3)
precursor - soybean chloroplast gi|2970447|gb|AAC05981.1|
aspartokinase-homoserine dehydrogenase [Glycine max]
Length = 916
Score = 177 bits (450), Expect = 5e-44
Identities = 90/98 (91%), Positives = 91/98 (92%)
Frame = -1
Query: 510 FDQMFAKTLEEAEYAGEVLRYVGVVDVTRKKGVVELRRYKKDHPFAPLSGSDNIIAFTTR 331
FDQ F K E+AE AGEVLRYVGVVDVT KKGVVELRRYKKDHPFA LSGSDNIIAFTTR
Sbjct: 819 FDQEFTKKQEDAENAGEVLRYVGVVDVTNKKGVVELRRYKKDHPFAQLSGSDNIIAFTTR 878
Query: 330 RYKDQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 217
RYKDQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS
Sbjct: 879 RYKDQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 916
>ref|NP_174408.1| putative aspartate kinase-homoserine dehydrogenase; protein id:
At1g31230.1 [Arabidopsis thaliana]
gi|25288158|pir||E86438 hypothetical protein F28K20.19 -
Arabidopsis thaliana gi|4512620|gb|AAD21689.1| Identical
to gb|X71364 gene for aspartate kinase homoserine
dehydrogenase from Arabidopsis thaliana
Length = 911
Score = 163 bits (413), Expect = 9e-40
Identities = 81/98 (82%), Positives = 87/98 (88%)
Frame = -1
Query: 510 FDQMFAKTLEEAEYAGEVLRYVGVVDVTRKKGVVELRRYKKDHPFAPLSGSDNIIAFTTR 331
FD+ +K EEAE AGEVLRYVGVVD KKG VEL+RYKKDHPFA LSG+DNIIAFTT+
Sbjct: 814 FDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTK 873
Query: 330 RYKDQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 217
RYK+QPLIVRGPGAGAQVTAGGIFSDILRLA YLGAPS
Sbjct: 874 RYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911
>pir||S46497 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC 1.1.1.3)
precursor - Arabidopsis thaliana
Length = 911
Score = 163 bits (413), Expect = 9e-40
Identities = 81/98 (82%), Positives = 87/98 (88%)
Frame = -1
Query: 510 FDQMFAKTLEEAEYAGEVLRYVGVVDVTRKKGVVELRRYKKDHPFAPLSGSDNIIAFTTR 331
FD+ +K EEAE AGEVLRYVGVVD KKG VEL+RYKKDHPFA LSG+DNIIAFTT+
Sbjct: 814 FDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTK 873
Query: 330 RYKDQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 217
RYK+QPLIVRGPGAGAQVTAGGIFSDILRLA YLGAPS
Sbjct: 874 RYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911
>pir||T06246 aspartate kinase (EC 2.7.2.4) / homoserine dehydrogenase (EC 1.1.1.3)
precursor - soybean (fragment) gi|2970556|gb|AAC05983.1|
aspartokinase-homoserine dehydrogenase [Glycine max]
Length = 909
Score = 162 bits (410), Expect = 2e-39
Identities = 82/91 (90%), Positives = 84/91 (92%)
Frame = -1
Query: 510 FDQMFAKTLEEAEYAGEVLRYVGVVDVTRKKGVVELRRYKKDHPFAPLSGSDNIIAFTTR 331
FDQ F K E+AE AGEVLRYVGVVDVT +KGVVELRRYKKDHPFA LSGSDNIIAFTTR
Sbjct: 819 FDQEFTKKQEDAENAGEVLRYVGVVDVTNEKGVVELRRYKKDHPFAQLSGSDNIIAFTTR 878
Query: 330 RYKDQPLIVRGPGAGAQVTAGGIFSDILRLA 238
RYKDQPLIVRGPGAGAQVTAGGIFSDILRLA
Sbjct: 879 RYKDQPLIVRGPGAGAQVTAGGIFSDILRLA 909
>dbj|BAC43372.1| putative aspartate kinase-homoserine dehydrogenase [Arabidopsis
thaliana]
Length = 911
Score = 162 bits (409), Expect = 3e-39
Identities = 80/98 (81%), Positives = 86/98 (87%)
Frame = -1
Query: 510 FDQMFAKTLEEAEYAGEVLRYVGVVDVTRKKGVVELRRYKKDHPFAPLSGSDNIIAFTTR 331
FD+ +K EEAE AGEVLRYVGVVD KKG VEL+RYKKDHPFA LSG+DNIIAFTT+
Sbjct: 814 FDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTK 873
Query: 330 RYKDQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 217
RYK+QPLIVRGPGAGAQVTAGGIFSD LRLA YLGAPS
Sbjct: 874 RYKEQPLIVRGPGAGAQVTAGGIFSDFLRLAFYLGAPS 911
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 444,882,856
Number of Sequences: 1393205
Number of extensions: 9727801
Number of successful extensions: 28203
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 26208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27837
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
