Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001083A_C01 KMC001083A_c01
(689 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51622 probable aldehyde oxidase (EC 1.2.3.1) [imported] - ... 119 1e-47
ref|NP_568407.1| aldehyde oxidase AAO1; protein id: At5g20960.1,... 119 1e-47
pir||T52049 probable aldehyde oxidase (EC 1.2.3.1) [imported] - ... 119 3e-46
ref|NP_563711.1| putative aldehyde oxidase; protein id: At1g0458... 108 1e-45
pir||T52051 probable aldehyde oxidase (EC 1.2.3.1) 2 [imported] ... 108 2e-45
>pir||T51622 probable aldehyde oxidase (EC 1.2.3.1) [imported] - Arabidopsis
thaliana gi|3172023|dbj|BAA28624.1| aldehyde oxidase
[Arabidopsis thaliana]
Length = 1368
Score = 119 bits (298), Expect(2) = 1e-47
Identities = 61/89 (68%), Positives = 71/89 (79%), Gaps = 3/89 (3%)
Frame = -3
Query: 546 FKSSIVGISQH--RVLSSKASGEPPLLLAASVHCATRAAIKEARKQLLSW-SHLDGPDST 376
F I+ QH RVLSSKASGEPPLLLAASVHCA RAA+KEARKQ+LSW S+ G D
Sbjct: 1274 FNVEILNSGQHKNRVLSSKASGEPPLLLAASVHCAVRAAVKEARKQILSWNSNKQGTDMY 1333
Query: 375 FQLEVPATMPVVKELIGLDIVERYLKWKM 289
F+L VPATMP+VKE GLD+VE+YL+WK+
Sbjct: 1334 FELPVPATMPIVKEFCGLDVVEKYLEWKI 1362
Score = 93.2 bits (230), Expect(2) = 1e-47
Identities = 43/54 (79%), Positives = 47/54 (86%)
Frame = -2
Query: 688 QIEGAFVQGLGFFMLEEYETNLDGLVLADGTWNYKIPTIDTIPLQFNVQILNSG 527
QIEGAFVQGLGFFMLEE+ N DGLV+ D TW YKIPT+DTIP QFNV+ILNSG
Sbjct: 1229 QIEGAFVQGLGFFMLEEFLMNSDGLVVTDSTWTYKIPTVDTIPRQFNVEILNSG 1282
>ref|NP_568407.1| aldehyde oxidase AAO1; protein id: At5g20960.1, supported by cDNA:
gi_2792301 [Arabidopsis thaliana]
Length = 1355
Score = 119 bits (298), Expect(2) = 1e-47
Identities = 61/89 (68%), Positives = 71/89 (79%), Gaps = 3/89 (3%)
Frame = -3
Query: 546 FKSSIVGISQH--RVLSSKASGEPPLLLAASVHCATRAAIKEARKQLLSW-SHLDGPDST 376
F I+ QH RVLSSKASGEPPLLLAASVHCA RAA+KEARKQ+LSW S+ G D
Sbjct: 1261 FNVEILNSGQHKNRVLSSKASGEPPLLLAASVHCAVRAAVKEARKQILSWNSNKQGTDMY 1320
Query: 375 FQLEVPATMPVVKELIGLDIVERYLKWKM 289
F+L VPATMP+VKE GLD+VE+YL+WK+
Sbjct: 1321 FELPVPATMPIVKEFCGLDVVEKYLEWKI 1349
Score = 93.2 bits (230), Expect(2) = 1e-47
Identities = 43/54 (79%), Positives = 47/54 (86%)
Frame = -2
Query: 688 QIEGAFVQGLGFFMLEEYETNLDGLVLADGTWNYKIPTIDTIPLQFNVQILNSG 527
QIEGAFVQGLGFFMLEE+ N DGLV+ D TW YKIPT+DTIP QFNV+ILNSG
Sbjct: 1216 QIEGAFVQGLGFFMLEEFLMNSDGLVVTDSTWTYKIPTVDTIPRQFNVEILNSG 1269
>pir||T52049 probable aldehyde oxidase (EC 1.2.3.1) [imported] - Arabidopsis
thaliana gi|2792302|gb|AAC39509.1| putative aldehyde
oxidase [Arabidopsis thaliana]
Length = 1355
Score = 119 bits (298), Expect(2) = 3e-46
Identities = 61/89 (68%), Positives = 71/89 (79%), Gaps = 3/89 (3%)
Frame = -3
Query: 546 FKSSIVGISQH--RVLSSKASGEPPLLLAASVHCATRAAIKEARKQLLSW-SHLDGPDST 376
F I+ QH RVLSSKASGEPPLLLAASVHCA RAA+KEARKQ+LSW S+ G D
Sbjct: 1261 FNVEILNSGQHKNRVLSSKASGEPPLLLAASVHCAVRAAVKEARKQILSWNSNKQGTDMY 1320
Query: 375 FQLEVPATMPVVKELIGLDIVERYLKWKM 289
F+L VPATMP+VKE GLD+VE+YL+WK+
Sbjct: 1321 FELPVPATMPIVKEFCGLDVVEKYLEWKI 1349
Score = 88.2 bits (217), Expect(2) = 3e-46
Identities = 42/54 (77%), Positives = 46/54 (84%)
Frame = -2
Query: 688 QIEGAFVQGLGFFMLEEYETNLDGLVLADGTWNYKIPTIDTIPLQFNVQILNSG 527
QIEGAFVQGLGFFMLEE+ N DGLV+ D T YKIPT+DTIP QFNV+ILNSG
Sbjct: 1216 QIEGAFVQGLGFFMLEEFLMNSDGLVVTDSTLTYKIPTVDTIPRQFNVEILNSG 1269
>ref|NP_563711.1| putative aldehyde oxidase; protein id: At1g04580.1, supported by
cDNA: gi_6759367 [Arabidopsis thaliana]
gi|6759368|dbj|BAA90299.1| aldehyde oxidase [Arabidopsis
thaliana]
Length = 1337
Score = 108 bits (271), Expect(2) = 1e-45
Identities = 55/84 (65%), Positives = 68/84 (80%), Gaps = 5/84 (5%)
Frame = -3
Query: 528 GISQHRVLSSKASGEPPLLLAASVHCATRAAIKEARKQLLSWS-----HLDGPDSTFQLE 364
G ++RVLSSKASGEPPLL+AASVHCATR+AI+EARKQ LSW+ H + D F+L
Sbjct: 1251 GHHKNRVLSSKASGEPPLLVAASVHCATRSAIREARKQYLSWNCIDDDHRERCDLGFELP 1310
Query: 363 VPATMPVVKELIGLDIVERYLKWK 292
VPATMPVVK+L GL+ +E+YL+WK
Sbjct: 1311 VPATMPVVKQLCGLESIEKYLEWK 1334
Score = 96.7 bits (239), Expect(2) = 1e-45
Identities = 45/55 (81%), Positives = 49/55 (88%)
Frame = -2
Query: 688 QIEGAFVQGLGFFMLEEYETNLDGLVLADGTWNYKIPTIDTIPLQFNVQILNSGH 524
QIEGAFVQG+GFFM EEY TN +GLV +GTW+YKIPTIDTIP QFNVQILNSGH
Sbjct: 1198 QIEGAFVQGIGFFMYEEYTTNENGLVNEEGTWDYKIPTIDTIPKQFNVQILNSGH 1252
>pir||T52051 probable aldehyde oxidase (EC 1.2.3.1) 2 [imported] - Arabidopsis
thaliana (fragment) gi|2792306|gb|AAC39511.1| putative
aldehyde oxidase [Arabidopsis thaliana]
Length = 256
Score = 108 bits (270), Expect(2) = 2e-45
Identities = 54/84 (64%), Positives = 68/84 (80%), Gaps = 5/84 (5%)
Frame = -3
Query: 528 GISQHRVLSSKASGEPPLLLAASVHCATRAAIKEARKQLLSWS-----HLDGPDSTFQLE 364
G ++R+LSSKASGEPPLL+AASVHCATR+AI+EARKQ LSW+ H + D F+L
Sbjct: 170 GHHKNRILSSKASGEPPLLVAASVHCATRSAIREARKQYLSWNCIDDDHRERCDLGFELP 229
Query: 363 VPATMPVVKELIGLDIVERYLKWK 292
VPATMPVVK+L GL+ +E+YL+WK
Sbjct: 230 VPATMPVVKQLCGLESIEKYLEWK 253
Score = 96.7 bits (239), Expect(2) = 2e-45
Identities = 45/55 (81%), Positives = 49/55 (88%)
Frame = -2
Query: 688 QIEGAFVQGLGFFMLEEYETNLDGLVLADGTWNYKIPTIDTIPLQFNVQILNSGH 524
QIEGAFVQG+GFFM EEY TN +GLV +GTW+YKIPTIDTIP QFNVQILNSGH
Sbjct: 117 QIEGAFVQGIGFFMYEEYTTNENGLVNEEGTWDYKIPTIDTIPKQFNVQILNSGH 171
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 604,428,970
Number of Sequences: 1393205
Number of extensions: 13195338
Number of successful extensions: 30646
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 29607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30602
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31118763720
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
