Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001005A_C01 KMC001005A_c01
(530 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E71405 probable ankyrin - Arabidopsis thaliana gi|2244792|e... 60 5e-19
ref|NP_567427.1| ankyrin like protein; protein id: At4g14360.1, ... 60 5e-19
ref|NP_566725.2| expressed protein; protein id: At3g23300.1 [Ara... 57 2e-18
gb|AAN41290.1| unknown protein [Arabidopsis thaliana] 57 2e-18
gb|AAK59642.2| unknown protein [Arabidopsis thaliana] 57 2e-18
>pir||E71405 probable ankyrin - Arabidopsis thaliana gi|2244792|emb|CAB10215.1|
ankyrin like protein [Arabidopsis thaliana]
gi|7268141|emb|CAB78478.1| ankyrin like protein
[Arabidopsis thaliana]
Length = 936
Score = 60.5 bits (145), Expect(2) = 5e-19
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -1
Query: 530 DLLLEMDRMLRPTGFIIIRDKPHVIDFVKKYLTAM 426
DLLLEMDR+LRP+GFIIIRDK V+DFVKKYL A+
Sbjct: 863 DLLLEMDRILRPSGFIIIRDKQRVVDFVKKYLKAL 897
Score = 55.1 bits (131), Expect(2) = 5e-19
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -2
Query: 424 HWEAVATADSSSDSEQDSNEVVLVVQKKLWLTTESFRDTE 305
HWE V T + SDS+QDS+ VV +VQKKLWLT+ES RD E
Sbjct: 898 HWEEVGTK-TDSDSDQDSDNVVFIVQKKLWLTSESLRDME 936
>ref|NP_567427.1| ankyrin like protein; protein id: At4g14360.1, supported by cDNA:
gi_16604604, supported by cDNA: gi_20259232 [Arabidopsis
thaliana] gi|16604605|gb|AAL24095.1| putative ankyrin
protein [Arabidopsis thaliana]
gi|20259233|gb|AAM14332.1| putative ankyrin protein
[Arabidopsis thaliana]
Length = 608
Score = 60.5 bits (145), Expect(2) = 5e-19
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -1
Query: 530 DLLLEMDRMLRPTGFIIIRDKPHVIDFVKKYLTAM 426
DLLLEMDR+LRP+GFIIIRDK V+DFVKKYL A+
Sbjct: 535 DLLLEMDRILRPSGFIIIRDKQRVVDFVKKYLKAL 569
Score = 55.1 bits (131), Expect(2) = 5e-19
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = -2
Query: 424 HWEAVATADSSSDSEQDSNEVVLVVQKKLWLTTESFRDTE 305
HWE V T + SDS+QDS+ VV +VQKKLWLT+ES RD E
Sbjct: 570 HWEEVGTK-TDSDSDQDSDNVVFIVQKKLWLTSESLRDME 608
>ref|NP_566725.2| expressed protein; protein id: At3g23300.1 [Arabidopsis thaliana]
gi|11994314|dbj|BAB02273.1| ankyrin-like protein
[Arabidopsis thaliana]
Length = 611
Score = 57.0 bits (136), Expect(2) = 2e-18
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 530 DLLLEMDRMLRPTGFIIIRDKPHVIDFVKKYLTAM 426
DLLLEMDR+LRP+GFI+IRDK V+D VKKYL A+
Sbjct: 538 DLLLEMDRILRPSGFILIRDKQSVVDLVKKYLKAL 572
Score = 56.6 bits (135), Expect(2) = 2e-18
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -2
Query: 424 HWEAVATADSSSDSEQDSNEVVLVVQKKLWLTTESFRDTE 305
HWEAV T ++S+S+QDS+ V+L+VQKKLWLT+ES RD E
Sbjct: 573 HWEAVETK-TASESDQDSDNVILIVQKKLWLTSESLRDLE 611
>gb|AAN41290.1| unknown protein [Arabidopsis thaliana]
Length = 376
Score = 57.0 bits (136), Expect(2) = 2e-18
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 530 DLLLEMDRMLRPTGFIIIRDKPHVIDFVKKYLTAM 426
DLLLEMDR+LRP+GFI+IRDK V+D VKKYL A+
Sbjct: 303 DLLLEMDRILRPSGFILIRDKQSVVDLVKKYLKAL 337
Score = 56.6 bits (135), Expect(2) = 2e-18
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -2
Query: 424 HWEAVATADSSSDSEQDSNEVVLVVQKKLWLTTESFRDTE 305
HWEAV T ++S+S+QDS+ V+L+VQKKLWLT+ES RD E
Sbjct: 338 HWEAVETK-TASESDQDSDNVILIVQKKLWLTSESLRDLE 376
>gb|AAK59642.2| unknown protein [Arabidopsis thaliana]
Length = 314
Score = 57.0 bits (136), Expect(2) = 2e-18
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 530 DLLLEMDRMLRPTGFIIIRDKPHVIDFVKKYLTAM 426
DLLLEMDR+LRP+GFI+IRDK V+D VKKYL A+
Sbjct: 241 DLLLEMDRILRPSGFILIRDKQSVVDLVKKYLKAL 275
Score = 56.6 bits (135), Expect(2) = 2e-18
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = -2
Query: 424 HWEAVATADSSSDSEQDSNEVVLVVQKKLWLTTESFRDTE 305
HWEAV T ++S+S+QDS+ V+L+VQKKLWLT+ES RD E
Sbjct: 276 HWEAVETK-TASESDQDSDNVILIVQKKLWLTSESLRDLE 314
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 448,167,011
Number of Sequences: 1393205
Number of extensions: 9310550
Number of successful extensions: 22095
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 21288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22084
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
