Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000991A_C01 KMC000991A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P51850|DCP1_PEA Pyruvate decarboxylase isozyme 1 (PDC) gi|214... 142 3e-33
gb|AAO72533.1| pyruvate decarboxylase 1 [Lotus corniculatus] 129 2e-29
sp|P51846|DCP2_TOBAC Pyruvate decarboxylase isozyme 2 (PDC) gi|1... 128 4e-29
sp|P51851|DCP2_PEA Pyruvate decarboxylase isozyme 2 (PDC) gi|214... 127 8e-29
gb|AAG13131.1|AF193791_1 pyruvate decarboxylase [Fragaria x anan... 125 4e-28
>sp|P51850|DCP1_PEA Pyruvate decarboxylase isozyme 1 (PDC) gi|2146786|pir||S65470
pyruvate decarboxylase (EC 4.1.1.1) (clone PDC1) -
garden pea gi|1177603|emb|CAA91444.1| pyruvate
decarboxylase [Pisum sativum]
Length = 593
Score = 142 bits (357), Expect = 3e-33
Identities = 66/76 (86%), Positives = 70/76 (91%)
Frame = -1
Query: 534 DYTRFVEAINNGQGKCWTAKVRTEDDLTEAIAAATGPQKDSLCFIEVFVHKDDTSQELLE 355
DYT FV AI+NGQGKCWTAKVRTE+DLTEAIA ATG +KDSLCFIEVF HKDDTS+ELLE
Sbjct: 518 DYTGFVSAIHNGQGKCWTAKVRTEEDLTEAIATATGAEKDSLCFIEVFAHKDDTSKELLE 577
Query: 354 WGSRVAAANGRPPNPQ 307
WGSRVAAAN RPPNPQ
Sbjct: 578 WGSRVAAANSRPPNPQ 593
>gb|AAO72533.1| pyruvate decarboxylase 1 [Lotus corniculatus]
Length = 606
Score = 129 bits (324), Expect = 2e-29
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = -1
Query: 534 DYTRFVEAINNGQGKCWTAKVRTEDDLTEAIAAATGPQKDSLCFIEVFVHKDDTSQELLE 355
+YT +EAI+NG+GKCWT+KV E++L EAIA ATGP+KD LCFIEV VHKDDTS+ELLE
Sbjct: 531 NYTGLIEAIHNGEGKCWTSKVFCEEELVEAIATATGPKKDCLCFIEVIVHKDDTSKELLE 590
Query: 354 WGSRVAAANGRPPNPQ 307
WGSRV+AANGRPPNPQ
Sbjct: 591 WGSRVSAANGRPPNPQ 606
>sp|P51846|DCP2_TOBAC Pyruvate decarboxylase isozyme 2 (PDC) gi|1362116|pir||S57821
pyruvate decarboxylase (EC 4.1.1.1) 2 - common tobacco
gi|551263|emb|CAA57448.1| pyruvate decarboxylase
[Nicotiana tabacum]
Length = 614
Score = 128 bits (322), Expect = 4e-29
Identities = 58/76 (76%), Positives = 67/76 (87%)
Frame = -1
Query: 534 DYTRFVEAINNGQGKCWTAKVRTEDDLTEAIAAATGPQKDSLCFIEVFVHKDDTSQELLE 355
+YT V+AI+NG+G CWT KVRTE++LTEAIA ATG +KD LCFIEV VHKDDTS+ELLE
Sbjct: 539 NYTGLVDAIHNGEGNCWTMKVRTEEELTEAIATATGEKKDCLCFIEVIVHKDDTSKELLE 598
Query: 354 WGSRVAAANGRPPNPQ 307
WGSRV +ANGRPPNPQ
Sbjct: 599 WGSRVCSANGRPPNPQ 614
>sp|P51851|DCP2_PEA Pyruvate decarboxylase isozyme 2 (PDC) gi|2146788|pir||S65471
pyruvate decarboxylase (EC 4.1.1.1) (clone PDC2) -
garden pea (fragment) gi|1177605|emb|CAA91445.1|
pyruvate decarboxylase [Pisum sativum]
Length = 405
Score = 127 bits (319), Expect = 8e-29
Identities = 58/76 (76%), Positives = 67/76 (87%)
Frame = -1
Query: 534 DYTRFVEAINNGQGKCWTAKVRTEDDLTEAIAAATGPQKDSLCFIEVFVHKDDTSQELLE 355
+YT V+AI+NG+GKCWT KV E++L EAIA ATGP+KDSLCFIEV VHKDDTS+ELLE
Sbjct: 330 NYTGLVDAIHNGEGKCWTTKVFCEEELVEAIAKATGPKKDSLCFIEVIVHKDDTSKELLE 389
Query: 354 WGSRVAAANGRPPNPQ 307
WGSRV+AAN RPPNPQ
Sbjct: 390 WGSRVSAANSRPPNPQ 405
>gb|AAG13131.1|AF193791_1 pyruvate decarboxylase [Fragaria x ananassa]
Length = 605
Score = 125 bits (313), Expect = 4e-28
Identities = 56/76 (73%), Positives = 65/76 (84%)
Frame = -1
Query: 534 DYTRFVEAINNGQGKCWTAKVRTEDDLTEAIAAATGPQKDSLCFIEVFVHKDDTSQELLE 355
+YT V+AI+NG+GKCWT KVR E++L EAI A GP+KDS CFIEV VHKDDTS+ELLE
Sbjct: 530 NYTGLVDAIHNGEGKCWTTKVRCEEELIEAIETANGPKKDSFCFIEVIVHKDDTSKELLE 589
Query: 354 WGSRVAAANGRPPNPQ 307
WGSRV+AAN RPPNPQ
Sbjct: 590 WGSRVSAANSRPPNPQ 605
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,433,505
Number of Sequences: 1393205
Number of extensions: 9770391
Number of successful extensions: 19576
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 19245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19572
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
