Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000928A_C01 KMC000928A_c01
(611 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD12665.1| putative fructose 1-,6-biphosphate aldolase [Tri... 55 9e-07
emb|CAB46520.1| putative fructose-bisphosphate aldolase [Phleum ... 53 3e-06
gb|AAM62481.1| fructose-bisphosphate aldolase-like protein [Arab... 53 4e-06
ref|NP_568127.1| fructose-bisphosphate aldolase -like protein; p... 53 4e-06
pir||T48396 fructose-bisphosphate aldolase-like protein - Arabid... 53 4e-06
>emb|CAD12665.1| putative fructose 1-,6-biphosphate aldolase [Triticum aestivum]
Length = 267
Score = 54.7 bits (130), Expect = 9e-07
Identities = 25/27 (92%), Positives = 26/27 (95%)
Frame = -1
Query: 611 ATLGSYKGDANLAEGASESLHVKDYKY 531
ATLG+YKGDA LAEGASESLHVKDYKY
Sbjct: 241 ATLGTYKGDATLAEGASESLHVKDYKY 267
>emb|CAB46520.1| putative fructose-bisphosphate aldolase [Phleum pratense]
Length = 227
Score = 53.1 bits (126), Expect = 3e-06
Identities = 24/27 (88%), Positives = 25/27 (91%)
Frame = -1
Query: 611 ATLGSYKGDANLAEGASESLHVKDYKY 531
ATLG+YKGDA L EGASESLHVKDYKY
Sbjct: 201 ATLGTYKGDATLGEGASESLHVKDYKY 227
>gb|AAM62481.1| fructose-bisphosphate aldolase-like protein [Arabidopsis thaliana]
Length = 393
Score = 52.8 bits (125), Expect = 4e-06
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 611 ATLGSYKGDANLAEGASESLHVKDYKY 531
ATLG YKGDA L EGASESLHVKDYKY
Sbjct: 367 ATLGGYKGDAQLGEGASESLHVKDYKY 393
>ref|NP_568127.1| fructose-bisphosphate aldolase -like protein; protein id:
At5g03690.1, supported by cDNA: 141747. [Arabidopsis
thaliana]
Length = 393
Score = 52.8 bits (125), Expect = 4e-06
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 611 ATLGSYKGDANLAEGASESLHVKDYKY 531
ATLG YKGDA L EGASESLHVKDYKY
Sbjct: 367 ATLGGYKGDAQLGEGASESLHVKDYKY 393
>pir||T48396 fructose-bisphosphate aldolase-like protein - Arabidopsis thaliana
gi|7340654|emb|CAB82934.1| fructose-bisphosphate
aldolase-like protein [Arabidopsis thaliana]
Length = 359
Score = 52.8 bits (125), Expect = 4e-06
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1
Query: 611 ATLGSYKGDANLAEGASESLHVKDYKY 531
ATLG YKGDA L EGASESLHVKDYKY
Sbjct: 333 ATLGGYKGDAQLGEGASESLHVKDYKY 359
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,046,510
Number of Sequences: 1393205
Number of extensions: 9266057
Number of successful extensions: 20511
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20490
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
