Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000893A_C01 KMC000893A_c01
(484 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA74900.1| anthranilate synthase alpha subunit 62 3e-09
dbj|BAA82095.1| anthranilate synthase alpha 2 subunit [Oryza sat... 59 3e-08
dbj|BAA82094.1| anthranilate synthase alpha 1 subunit [Oryza sat... 59 3e-08
gb|AAK82452.1|AC091247_19 anthranilate synthase alpha 1 subunit ... 59 3e-08
pir||T50834 anthranilate synthase (EC 4.1.3.27) alpha chain [imp... 59 4e-08
>gb|AAA74900.1| anthranilate synthase alpha subunit
Length = 608
Score = 62.0 bits (149), Expect = 3e-09
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2
Query: 98 VTGELQDHLTSWDALRAALPVGTVSGAPKVR 190
VTGEL DHLTSWDALRAALPVGTVSGAPKV+
Sbjct: 473 VTGELLDHLTSWDALRAALPVGTVSGAPKVK 503
>dbj|BAA82095.1| anthranilate synthase alpha 2 subunit [Oryza sativa (japonica
cultivar-group)]
Length = 606
Score = 58.9 bits (141), Expect = 3e-08
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +2
Query: 98 VTGELQDHLTSWDALRAALPVGTVSGAPKVR 190
V+GEL DHL SWDALRAALPVGTVSGAPKV+
Sbjct: 470 VSGELDDHLQSWDALRAALPVGTVSGAPKVK 500
>dbj|BAA82094.1| anthranilate synthase alpha 1 subunit [Oryza sativa (japonica
cultivar-group)]
Length = 577
Score = 58.9 bits (141), Expect = 3e-08
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +2
Query: 98 VTGELQDHLTSWDALRAALPVGTVSGAPKVR 190
VTGEL+D LT WDALRAALPVGTVSGAPKVR
Sbjct: 442 VTGELRDDLTCWDALRAALPVGTVSGAPKVR 472
>gb|AAK82452.1|AC091247_19 anthranilate synthase alpha 1 subunit [Oryza sativa]
gi|18855065|gb|AAL79757.1|AC096687_21 anthranilate
synthase alpha 1 subunit [Oryza sativa]
Length = 577
Score = 58.9 bits (141), Expect = 3e-08
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +2
Query: 98 VTGELQDHLTSWDALRAALPVGTVSGAPKVR 190
VTGEL+D LT WDALRAALPVGTVSGAPKVR
Sbjct: 442 VTGELRDDLTCWDALRAALPVGTVSGAPKVR 472
>pir||T50834 anthranilate synthase (EC 4.1.3.27) alpha chain [imported] - Ruta
graveolens gi|960291|gb|AAA74901.1| anthranilate
synthase alpha subunit
Length = 613
Score = 58.5 bits (140), Expect = 4e-08
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +2
Query: 98 VTGELQDHLTSWDALRAALPVGTVSGAPKVR 190
VTGELQD+L+ WDALRAALPVGTVSGAPKV+
Sbjct: 475 VTGELQDNLSCWDALRAALPVGTVSGAPKVK 505
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 404,141,654
Number of Sequences: 1393205
Number of extensions: 8188401
Number of successful extensions: 19711
Number of sequences better than 10.0: 274
Number of HSP's better than 10.0 without gapping: 19203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19707
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13689082854
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
