Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000878A_C02 KMC000878A_c02
(545 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG45488.1| phospholipase PLDb2 [Lycopersicon esculentum] 152 3e-36
gb|AAD43343.1|AF159139_1 phospholipase D [Gossypium hirsutum] 149 2e-35
gb|AAN40512.1| phospholipase D beta 1 isoform 1b-2 [Gossypium hi... 149 2e-35
gb|AAN05431.1| phospholipase D beta 1 isoform 1b [Gossypium hirs... 149 3e-35
gb|AAN05430.1| phospholipase D beta 1 isoform 1a [Gossypium hirs... 147 8e-35
>gb|AAG45488.1| phospholipase PLDb2 [Lycopersicon esculentum]
Length = 895
Score = 152 bits (384), Expect = 3e-36
Identities = 65/93 (69%), Positives = 82/93 (87%)
Frame = -3
Query: 543 RMSLWSEHIGAVEECFHRPESLECVRRIRSLSEHNWRQYVADEVTEMKGHLLKYPLEVDS 364
RMSLW+EH+G VE+CF +PESLECVRR+RS+ E+NW+Q+ +DEVTEM+GHLLKYP+EVD
Sbjct: 803 RMSLWAEHLGVVEDCFRQPESLECVRRVRSMGEYNWKQFASDEVTEMRGHLLKYPVEVDR 862
Query: 363 KGKVKTLPGCETFPDVGGSIKGTFIKVKENLTI 265
KGKVK L GC FPDVGG+I G+F+ ++ENLTI
Sbjct: 863 KGKVKNLTGCANFPDVGGNIIGSFLAIQENLTI 895
>gb|AAD43343.1|AF159139_1 phospholipase D [Gossypium hirsutum]
Length = 829
Score = 149 bits (377), Expect = 2e-35
Identities = 66/93 (70%), Positives = 81/93 (86%)
Frame = -3
Query: 543 RMSLWSEHIGAVEECFHRPESLECVRRIRSLSEHNWRQYVADEVTEMKGHLLKYPLEVDS 364
RMSLW+EHIG VE+CF RPESLECVRRI +++ NWRQ+ A+EVTEM+GHLLKYP+EVD
Sbjct: 737 RMSLWAEHIGVVEDCFARPESLECVRRINQMAKLNWRQFAAEEVTEMRGHLLKYPVEVDP 796
Query: 363 KGKVKTLPGCETFPDVGGSIKGTFIKVKENLTI 265
KGKV+ LPG ETFPD GGS+ G+F+ ++ENLTI
Sbjct: 797 KGKVRPLPGSETFPDTGGSVVGSFLGIQENLTI 829
>gb|AAN40512.1| phospholipase D beta 1 isoform 1b-2 [Gossypium hirsutum]
Length = 522
Score = 149 bits (377), Expect = 2e-35
Identities = 66/93 (70%), Positives = 81/93 (86%)
Frame = -3
Query: 543 RMSLWSEHIGAVEECFHRPESLECVRRIRSLSEHNWRQYVADEVTEMKGHLLKYPLEVDS 364
RMSLW+EHIG VE+CF RPESLECVRRI +++ NWRQ+ A+EVTEM+GHLLKYP+EVD
Sbjct: 430 RMSLWAEHIGVVEDCFARPESLECVRRINQMAKLNWRQFAAEEVTEMRGHLLKYPVEVDP 489
Query: 363 KGKVKTLPGCETFPDVGGSIKGTFIKVKENLTI 265
KGKV+ LPG ETFPD GGS+ G+F+ ++ENLTI
Sbjct: 490 KGKVRPLPGSETFPDTGGSVVGSFLGIQENLTI 522
>gb|AAN05431.1| phospholipase D beta 1 isoform 1b [Gossypium hirsutum]
Length = 1162
Score = 149 bits (375), Expect = 3e-35
Identities = 66/93 (70%), Positives = 80/93 (85%)
Frame = -3
Query: 543 RMSLWSEHIGAVEECFHRPESLECVRRIRSLSEHNWRQYVADEVTEMKGHLLKYPLEVDS 364
RMSLW+EH+G VE+CF RPESLECVRRI +++ NWRQ+ A+EVTEM+GHLLKYP+EVD
Sbjct: 1070 RMSLWAEHVGVVEDCFARPESLECVRRINQMAKLNWRQFAAEEVTEMRGHLLKYPVEVDP 1129
Query: 363 KGKVKTLPGCETFPDVGGSIKGTFIKVKENLTI 265
KGKVK LPG E+FPD GGS+ G+FI + ENLTI
Sbjct: 1130 KGKVKPLPGSESFPDTGGSVVGSFIGIHENLTI 1162
>gb|AAN05430.1| phospholipase D beta 1 isoform 1a [Gossypium hirsutum]
Length = 1124
Score = 147 bits (371), Expect = 8e-35
Identities = 64/93 (68%), Positives = 80/93 (85%)
Frame = -3
Query: 543 RMSLWSEHIGAVEECFHRPESLECVRRIRSLSEHNWRQYVADEVTEMKGHLLKYPLEVDS 364
RMSLW+EH+G VE+CF RPESLECVRRI ++ NWRQ+ A+EVTEM+GHL+KYP+EVD
Sbjct: 1032 RMSLWAEHVGVVEDCFARPESLECVRRINQMTILNWRQFAAEEVTEMRGHLMKYPVEVDP 1091
Query: 363 KGKVKTLPGCETFPDVGGSIKGTFIKVKENLTI 265
KGKVK LPG ETFPD GG++ G+F+ ++ENLTI
Sbjct: 1092 KGKVKPLPGAETFPDTGGNVVGSFLGIQENLTI 1124
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 444,299,770
Number of Sequences: 1393205
Number of extensions: 8931755
Number of successful extensions: 23300
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 22671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23250
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
