Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000861A_C02 KMC000861A_c02
(624 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_182215.2| unknown protein; protein id: At2g46920.1, suppo... 126 4e-51
gb|AAM12971.1| unknown protein [Arabidopsis thaliana] 125 9e-51
gb|AAO65883.1| putative protein phosphatase 2C [Oryza sativa (ja... 107 2e-42
ref|NP_187551.1| unknown protein; protein id: At3g09400.1 [Arabi... 102 3e-42
gb|AAM61450.1| unknown [Arabidopsis thaliana] 100 8e-41
>ref|NP_182215.2| unknown protein; protein id: At2g46920.1, supported by cDNA:
gi_20260145 [Arabidopsis thaliana]
Length = 856
Score = 126 bits (316), Expect(3) = 4e-51
Identities = 54/75 (72%), Positives = 67/75 (89%)
Frame = -2
Query: 524 PSFNEPLLEMFRVDYVGNAPYLSCTSAVLHHRLSSSDRFLVLSSDGLYQYFNHEEVVAHV 345
P+FNE LLEMF+V+Y+G PY++C +HHRL+SSDRF+VLSSDGLY+YF++EEVVAHV
Sbjct: 719 PNFNEALLEMFQVEYIGTDPYITCEPCTVHHRLTSSDRFMVLSSDGLYEYFSNEEVVAHV 778
Query: 344 TWFMENVPEGDPAPY 300
TWF+ENVPEGDPA Y
Sbjct: 779 TWFIENVPEGDPAQY 793
Score = 95.1 bits (235), Expect(3) = 4e-51
Identities = 46/51 (90%), Positives = 48/51 (93%)
Frame = -3
Query: 298 LIAELLFRAAKKNGMDFHELLGIPQGDRRKYHDDVSVMVVSLEGRIWRSSG 146
LIAELL RAA KNGM+FH+LL IPQGDRRKYHDDVSVMVVSLEGRIWRSSG
Sbjct: 794 LIAELLSRAATKNGMEFHDLLDIPQGDRRKYHDDVSVMVVSLEGRIWRSSG 844
Score = 23.1 bits (48), Expect(3) = 4e-51
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1
Query: 624 RAFGAGFLKR 595
RAFGAGFLK+
Sbjct: 709 RAFGAGFLKK 718
>gb|AAM12971.1| unknown protein [Arabidopsis thaliana]
Length = 856
Score = 125 bits (313), Expect(3) = 9e-51
Identities = 53/75 (70%), Positives = 67/75 (88%)
Frame = -2
Query: 524 PSFNEPLLEMFRVDYVGNAPYLSCTSAVLHHRLSSSDRFLVLSSDGLYQYFNHEEVVAHV 345
P+FNE LLEMF+V+Y+G PY++C +HHRL+SSDRF+VLSSDGLY+Y+++EEVVAHV
Sbjct: 719 PNFNEALLEMFQVEYIGTDPYITCEPCTVHHRLTSSDRFMVLSSDGLYEYYSNEEVVAHV 778
Query: 344 TWFMENVPEGDPAPY 300
TWF+ENVPEGDPA Y
Sbjct: 779 TWFIENVPEGDPAQY 793
Score = 95.1 bits (235), Expect(3) = 9e-51
Identities = 46/51 (90%), Positives = 48/51 (93%)
Frame = -3
Query: 298 LIAELLFRAAKKNGMDFHELLGIPQGDRRKYHDDVSVMVVSLEGRIWRSSG 146
LIAELL RAA KNGM+FH+LL IPQGDRRKYHDDVSVMVVSLEGRIWRSSG
Sbjct: 794 LIAELLSRAATKNGMEFHDLLDIPQGDRRKYHDDVSVMVVSLEGRIWRSSG 844
Score = 23.1 bits (48), Expect(3) = 9e-51
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1
Query: 624 RAFGAGFLKR 595
RAFGAGFLK+
Sbjct: 709 RAFGAGFLKK 718
>gb|AAO65883.1| putative protein phosphatase 2C [Oryza sativa (japonica
cultivar-group)]
Length = 639
Score = 107 bits (268), Expect(3) = 2e-42
Identities = 46/75 (61%), Positives = 60/75 (79%)
Frame = -2
Query: 524 PSFNEPLLEMFRVDYVGNAPYLSCTSAVLHHRLSSSDRFLVLSSDGLYQYFNHEEVVAHV 345
P +N+ LLEMFR+DYVG++PY+SC ++ HH+LS+ DRFL+LSSDGLYQYF +EE VA V
Sbjct: 514 PKWNDALLEMFRIDYVGSSPYISCNPSLFHHKLSTRDRFLILSSDGLYQYFTNEEAVAQV 573
Query: 344 TWFMENVPEGDPAPY 300
F+ PEGDPA +
Sbjct: 574 EMFIATTPEGDPAQH 588
Score = 84.7 bits (208), Expect(3) = 2e-42
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = -3
Query: 298 LIAELLFRAAKKNGMDFHELLGIPQGDRRKYHDDVSVMVVSLEGRIWRS 152
L+ E+LFRAA K GMDFHEL+ IP GDRR+YHDDVSV+V+SLEGRIWRS
Sbjct: 589 LVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRS 637
Score = 22.7 bits (47), Expect(3) = 2e-42
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1
Query: 624 RAFGAGFLKR 595
RAFGAGFLK+
Sbjct: 504 RAFGAGFLKQ 513
>ref|NP_187551.1| unknown protein; protein id: At3g09400.1 [Arabidopsis thaliana]
gi|6478930|gb|AAF14035.1|AC011436_19 unknown protein
[Arabidopsis thaliana]
Length = 650
Score = 102 bits (255), Expect(3) = 3e-42
Identities = 44/75 (58%), Positives = 60/75 (79%)
Frame = -2
Query: 524 PSFNEPLLEMFRVDYVGNAPYLSCTSAVLHHRLSSSDRFLVLSSDGLYQYFNHEEVVAHV 345
P +NE LLEMFR+DYVG +PY++C+ ++ HHRLSS D+FL+LSSDGLY+YF++EE + V
Sbjct: 525 PKWNEALLEMFRIDYVGTSPYITCSPSLHHHRLSSRDKFLILSSDGLYEYFSNEEAIFEV 584
Query: 344 TWFMENVPEGDPAPY 300
F+ PEGDPA +
Sbjct: 585 DSFISAFPEGDPAQH 599
Score = 89.0 bits (219), Expect(3) = 3e-42
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = -3
Query: 298 LIAELLFRAAKKNGMDFHELLGIPQGDRRKYHDDVSVMVVSLEGRIWRSS 149
LI E+L RAAKK GMDFHELL IPQGDRR+YHDDVSV+V+SLEGRIWRSS
Sbjct: 600 LIQEVLLRAAKKYGMDFHELLEIPQGDRRRYHDDVSVIVISLEGRIWRSS 649
Score = 22.7 bits (47), Expect(3) = 3e-42
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1
Query: 624 RAFGAGFLKR 595
RAFGAGFLK+
Sbjct: 515 RAFGAGFLKQ 524
>gb|AAM61450.1| unknown [Arabidopsis thaliana]
Length = 662
Score = 100 bits (250), Expect(3) = 8e-41
Identities = 44/75 (58%), Positives = 57/75 (75%)
Frame = -2
Query: 524 PSFNEPLLEMFRVDYVGNAPYLSCTSAVLHHRLSSSDRFLVLSSDGLYQYFNHEEVVAHV 345
P +N LLEMF++DYVG +PY++C ++ HHRL S DRFL+LSSDGLYQYF +EE V+ V
Sbjct: 537 PKWNNALLEMFQIDYVGKSPYINCLPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEV 596
Query: 344 TWFMENVPEGDPAPY 300
F+ PEGDPA +
Sbjct: 597 ELFITLQPEGDPAQH 611
Score = 86.3 bits (212), Expect(3) = 8e-41
Identities = 38/49 (77%), Positives = 46/49 (93%)
Frame = -3
Query: 298 LIAELLFRAAKKNGMDFHELLGIPQGDRRKYHDDVSVMVVSLEGRIWRS 152
L+ ELLFRAAKK GMDFHELL IPQG+RR+YHDDVS++V+SLEGR+W+S
Sbjct: 612 LVQELLFRAAKKAGMDFHELLEIPQGERRRYHDDVSIVVISLEGRMWKS 660
Score = 22.7 bits (47), Expect(3) = 8e-41
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1
Query: 624 RAFGAGFLKR 595
RAFGAGFLK+
Sbjct: 527 RAFGAGFLKQ 536
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 577,880,731
Number of Sequences: 1393205
Number of extensions: 13452401
Number of successful extensions: 31421
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 30454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31393
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25301904073
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
