KMC000849A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC000849A_C02 KMC000849A_c02
atAATAAGAATCAAGGAAATTTATTTCAGAAAACATTATTGGCTGTAAACAAATATCTCA
TAGAATGATACATCGTGCATACTATAAGTACACCTACATGACCCTTGTATGCACTTATTT
GAGCATGCATAGTACTCGTGCATATTCATGTGTACTACCTTAACACATTAGAAAAATTAC
AAACATAAAACTCGAGTATGAATATAACTTCACAAATTCTACTTTGATCATGAAGAACTA
CTTGAAAACCAGTTTCCAGAGTGGTTTTATTGGTTCGAAGAATCTCACCCAACCAACATG
TCCCCGATTCAAAATCAGTGCAACACTGAAGAGAAGAACTACTTGAAAACATTGTTTATG
ACTGGGCGTGATTTACACATAGCCTTCACAGGAATAGACTTCATCAAGACAAACCCATCT
CGCTCGCCCATATCAATCTCTTCATCACTCACACGTTTCCAATCAAAGCACTGAATCAAC
AACGCTAGAGTCATGCTGATAGCACGAATCGCCAAGAGCTCTCCGGGGCACGCCCTTCT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC000849A_C02 KMC000849A_c02
         (539 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA93634.1| cytochrome P450 [Lotus japonicus]                     135  3e-31
emb|CAA10067.1| cytochrome P450 [Cicer arietinum]                     113  2e-24
emb|CAB41490.1| cytochrome P450 monooxygenase [Cicer arietinum]       111  5e-24
sp|P93147|C81E_GLYEC Cytochrome P450 81E1 (Isoflavone 2'-hydroxy...   109  2e-23
dbj|BAA74465.1| cytochrome P450 [Glycyrrhiza echinata]                109  2e-23

>dbj|BAA93634.1| cytochrome P450 [Lotus japonicus]
          Length = 499

 Score =  135 bits (340), Expect = 3e-31
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = -1

Query: 539 RRACPGELLAIRAISMTLALLIQCFDWKRVSDEEIDMGERDGFVLMKSIPVKAMCKSRPV 360
           RRACPGELLAIRAISMTLALLIQCFDWKRVSDEEIDMGERDGFVLMKSIPVKAMCKSRPV
Sbjct: 434 RRACPGELLAIRAISMTLALLIQCFDWKRVSDEEIDMGERDGFVLMKSIPVKAMCKSRPV 493

Query: 359 INNVFK 342
           INNVFK
Sbjct: 494 INNVFK 499

>emb|CAA10067.1| cytochrome P450 [Cicer arietinum]
          Length = 498

 Score =  113 bits (282), Expect = 2e-24
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = -1

Query: 539 RRACPGELLAIRAISMTLALLIQCFDWKRVSDEEIDMGERDGFVLMKSIPVKAMCKSRPV 360
           RR CPGE LA+R ISMTLALL+QCFDWKR SD++IDM ERDGFVL K IP+KAMCK+RPV
Sbjct: 433 RRVCPGEALALRTISMTLALLVQCFDWKRTSDDKIDMAERDGFVLTKLIPLKAMCKTRPV 492

Query: 359 INNVFK 342
           +N VFK
Sbjct: 493 VNKVFK 498

>emb|CAB41490.1| cytochrome P450 monooxygenase [Cicer arietinum]
          Length = 498

 Score =  111 bits (278), Expect = 5e-24
 Identities = 50/66 (75%), Positives = 57/66 (85%)
 Frame = -1

Query: 539 RRACPGELLAIRAISMTLALLIQCFDWKRVSDEEIDMGERDGFVLMKSIPVKAMCKSRPV 360
           RR CPGE LA+R ISMTLALLIQCFDWKR SD+ IDM ERDGFVL K +P+KAMCK+RPV
Sbjct: 433 RRVCPGEALALRTISMTLALLIQCFDWKRTSDDMIDMAERDGFVLTKLVPLKAMCKTRPV 492

Query: 359 INNVFK 342
           +N +FK
Sbjct: 493 VNKIFK 498

>sp|P93147|C81E_GLYEC Cytochrome P450 81E1 (Isoflavone 2'-hydroxylase) (P450 91A4) (CYP
           GE-3) gi|2443348|dbj|BAA22422.1| cytochrome P450
           [Glycyrrhiza echinata]
          Length = 499

 Score =  109 bits (272), Expect = 2e-23
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = -1

Query: 539 RRACPGELLAIRAISMTLALLIQCFDWKRVSDEEIDMGERDGFVLMKSIPVKAMCKSRPV 360
           RRACPGE LAIRAISMTLALLIQCFDWK ++ ++ID+ ERDGF L K +P+KAMCKSRPV
Sbjct: 433 RRACPGEGLAIRAISMTLALLIQCFDWKLINGDKIDLAERDGFTLTKLVPLKAMCKSRPV 492

Query: 359 INNVFK 342
           IN VFK
Sbjct: 493 INKVFK 498

>dbj|BAA74465.1| cytochrome P450 [Glycyrrhiza echinata]
          Length = 499

 Score =  109 bits (272), Expect = 2e-23
 Identities = 52/66 (78%), Positives = 57/66 (85%)
 Frame = -1

Query: 539 RRACPGELLAIRAISMTLALLIQCFDWKRVSDEEIDMGERDGFVLMKSIPVKAMCKSRPV 360
           RRACPGE LAIRAISMTLALLIQCFDWK  + ++IDM ERDGF L K +P+KAMCKSRPV
Sbjct: 433 RRACPGEGLAIRAISMTLALLIQCFDWKLTNGDKIDMAERDGFTLTKLVPLKAMCKSRPV 492

Query: 359 INNVFK 342
           IN VFK
Sbjct: 493 INKVFK 498

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 426,142,066
Number of Sequences: 1393205
Number of extensions: 8588248
Number of successful extensions: 22254
Number of sequences better than 10.0: 460
Number of HSP's better than 10.0 without gapping: 21724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22219
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 GNf072e03 BP072704 1 545
2 MR011e01_f BP076789 3 394
3 GNf042c08 BP070450 3 397
4 MR001h07_f BP076039 3 380
5 MR001a09_f BP075974 3 420
6 GENf014b03 BP058919 3 463
7 GNf084c10 BP073550 3 91
8 GNf044c03 BP070591 3 413
9 GENLf081c10 BP066747 4 502
10 MR063b09_f BP080812 4 392
11 MR017e01_f BP077276 4 399
12 MR077c01_f BP081914 4 102
13 MR080a10_f BP082128 4 481
14 MR014h06_f BP077070 5 479
15 GNf085g03 BP073659 6 538
16 MR084c09_f BP082455 6 358
17 GNf053e11 BP071323 6 505
18 GNf054c10 BP071385 7 451
19 MR070f12_f BP081401 7 543
20 GENLf040e04 BP064459 8 479
21 MR014a03_f BP076996 8 230
22 MRL018b05_f BP084621 9 349
23 MR077d07_f BP081929 9 99
24 MR031f02_f BP078398 10 390
25 GNf053e12 BP071324 10 484
26 MR030c07_f BP078295 27 378
27 MR027e10_f BP078089 27 449
28 MR018e01_f BP077359 31 425
29 MR058f06_f BP080470 39 422
30 MR064g07_f BP080939 42 426




Lotus japonicus
Kazusa DNA Research Institute