Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000835A_C02 KMC000835A_c02
(689 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196082.1| 8-amino-7-oxononanoate synthase - like protein;... 148 6e-35
dbj|BAC43668.1| putative 8-amino-7-oxononanoate synthase [Arabid... 148 6e-35
dbj|BAB68094.1| putative 8-amino-7-oxononanoate synthase [Oryza ... 125 6e-28
gb|AAK31282.1|AC079890_18 putative 8-amino-7-oxononanoate syntha... 78 1e-13
ref|ZP_00066273.1| hypothetical protein [Microbulbifer degradans... 70 3e-11
>ref|NP_196082.1| 8-amino-7-oxononanoate synthase - like protein; protein id:
At5g04620.1 [Arabidopsis thaliana]
gi|11357149|pir||T48458 8-amino-7-oxononanoate
synthase-like protein - Arabidopsis thaliana
gi|7406466|emb|CAB85568.1| 8-amino-7-oxononanoate
synthase-like protein [Arabidopsis thaliana]
Length = 469
Score = 148 bits (374), Expect = 6e-35
Identities = 71/113 (62%), Positives = 91/113 (79%)
Frame = -2
Query: 688 TATPVPVAAAAHAAVGVSKHETWRRKAIWNHVKDFHLLTGIPVTSHIISLVVGSEDKALQ 509
TA PVP+AAAA+AAV V++ E WRRKAIW VK+F L+G+ ++S IISLVVG+++KAL+
Sbjct: 342 TAIPVPMAAAAYAAVVVARKEIWRRKAIWERVKEFKELSGVDISSPIISLVVGNQEKALK 401
Query: 508 ARRFLLQSGFHVTAIGPPVVPPNSCRLRVALSTVHTRQDLENLTAALSRCINF 350
A R+LL+SGFHV AI PP VPPNSCRLRV LS HT +D++ L ALS C++F
Sbjct: 402 ASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 454
>dbj|BAC43668.1| putative 8-amino-7-oxononanoate synthase [Arabidopsis thaliana]
Length = 343
Score = 148 bits (374), Expect = 6e-35
Identities = 71/113 (62%), Positives = 91/113 (79%)
Frame = -2
Query: 688 TATPVPVAAAAHAAVGVSKHETWRRKAIWNHVKDFHLLTGIPVTSHIISLVVGSEDKALQ 509
TA PVP+AAAA+AAV V++ E WRRKAIW VK+F L+G+ ++S IISLVVG+++KAL+
Sbjct: 216 TAIPVPMAAAAYAAVVVARKEIWRRKAIWERVKEFKELSGVDISSPIISLVVGNQEKALK 275
Query: 508 ARRFLLQSGFHVTAIGPPVVPPNSCRLRVALSTVHTRQDLENLTAALSRCINF 350
A R+LL+SGFHV AI PP VPPNSCRLRV LS HT +D++ L ALS C++F
Sbjct: 276 ASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 328
>dbj|BAB68094.1| putative 8-amino-7-oxononanoate synthase [Oryza sativa (japonica
cultivar-group)]
Length = 436
Score = 125 bits (314), Expect = 6e-28
Identities = 63/108 (58%), Positives = 78/108 (71%)
Frame = -2
Query: 688 TATPVPVAAAAHAAVGVSKHETWRRKAIWNHVKDFHLLTGIPVTSHIISLVVGSEDKALQ 509
TA PVPV A+ +AA+ VSK E WRR IW HV+ F LT + +TS IIS+VVGSE+ AL+
Sbjct: 311 TALPVPVVASVYAALHVSKKERWRRSVIWRHVQYFASLTKLDLTSPIISIVVGSEEAALR 370
Query: 508 ARRFLLQSGFHVTAIGPPVVPPNSCRLRVALSTVHTRQDLENLTAALS 365
A R +L+SGFHVT I PP VP NSCRLR+ LS H+ D++ L ALS
Sbjct: 371 AGRHMLRSGFHVTPIRPPTVPQNSCRLRITLSASHSLDDIKRLVDALS 418
>gb|AAK31282.1|AC079890_18 putative 8-amino-7-oxononanoate synthase [Oryza sativa]
gi|18873844|gb|AAL79790.1|AC079874_13 putative
aminotransferase [Oryza sativa]
Length = 397
Score = 77.8 bits (190), Expect = 1e-13
Identities = 42/86 (48%), Positives = 56/86 (64%)
Frame = -2
Query: 622 WRRKAIWNHVKDFHLLTGIPVTSHIISLVVGSEDKALQARRFLLQSGFHVTAIGPPVVPP 443
W+R I + + F T +PV + S+ VGSE AL+A R +L+SGFHVT I PP VPP
Sbjct: 296 WKR-LIQSRGRSFIFSTALPVPV-VASVYVGSEKAALRAGRDMLRSGFHVTPIRPPTVPP 353
Query: 442 NSCRLRVALSTVHTRQDLENLTAALS 365
NSCRLR+ LS H+ D++ L AL+
Sbjct: 354 NSCRLRITLSASHSSDDIKRLVDALT 379
>ref|ZP_00066273.1| hypothetical protein [Microbulbifer degradans 2-40]
Length = 414
Score = 70.1 bits (170), Expect = 3e-11
Identities = 42/114 (36%), Positives = 63/114 (54%), Gaps = 6/114 (5%)
Frame = -2
Query: 688 TATPVPVAAAAHAAVGVSKHETWRRKAIWNHVKDFH------LLTGIPVTSHIISLVVGS 527
TA P VAAA A++ + + E WRR+ + ++ F L +P S I +V+G
Sbjct: 288 TALPPAVAAATRASLHLLETEHWRREKLNALIQQFRGGCEALNLQLMPSQSPIQPIVLGE 347
Query: 526 EDKALQARRFLLQSGFHVTAIGPPVVPPNSCRLRVALSTVHTRQDLENLTAALS 365
+ AL + + + GF +TAI PP VP + RLR+ LS H+ QD+E L AL+
Sbjct: 348 DAVALNVSKKMAERGFWITAIRPPTVPEGTARLRITLSAEHSEQDVEQLLNALA 401
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 581,324,171
Number of Sequences: 1393205
Number of extensions: 12076622
Number of successful extensions: 33733
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 30301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33340
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31118763720
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
