Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000799A_C01 KMC000799A_c01
(542 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD55502.1|AC008148_12 Unknown protein [Arabidopsis thaliana] 124 1e-52
ref|NP_177257.2| unknown protein; protein id: At1g71010.1, suppo... 124 1e-52
dbj|BAC24937.1| P0479C08.11 [Oryza sativa (japonica cultivar-gro... 124 5e-49
ref|NP_195050.1| putative protein; protein id: At4g33240.1 [Arab... 118 3e-47
gb|AAK55470.1|AC084295_3 putative phosphoinositide kinase [Oryza... 114 5e-46
>gb|AAD55502.1|AC008148_12 Unknown protein [Arabidopsis thaliana]
Length = 1648
Score = 124 bits (312), Expect(2) = 1e-52
Identities = 58/70 (82%), Positives = 67/70 (94%)
Frame = -2
Query: 541 MLDMNLLESLRTKPMFLGSKAQRKLERAVWNDTSFLASVDVMDYSLLVGVDEEKNELVLG 362
+LDMNLLE+LRT+P+FLGSKA+R LERA+WNDT+FLASVDVMDYSLLVG DEE+ ELVLG
Sbjct: 1528 LLDMNLLETLRTEPIFLGSKAKRSLERAIWNDTNFLASVDVMDYSLLVGFDEERKELVLG 1587
Query: 361 IIDYMRQYTW 332
IID+MRQYTW
Sbjct: 1588 IIDFMRQYTW 1597
Score = 103 bits (257), Expect(2) = 1e-52
Identities = 46/50 (92%), Positives = 50/50 (100%)
Frame = -3
Query: 327 KHLETWVKASGILGGPKNASPTIVSPKQYKKRFRKAMTTYFLTLPDPWSS 178
KHLETWVKASGILGGPKNASPTIVSPKQYK+RFRKAMTTYFLT+P+PW+S
Sbjct: 1599 KHLETWVKASGILGGPKNASPTIVSPKQYKRRFRKAMTTYFLTVPEPWTS 1648
>ref|NP_177257.2| unknown protein; protein id: At1g71010.1, supported by cDNA:
gi_17473835 [Arabidopsis thaliana]
gi|17473836|gb|AAL38344.1| unknown protein [Arabidopsis
thaliana]
Length = 793
Score = 124 bits (312), Expect(2) = 1e-52
Identities = 58/70 (82%), Positives = 67/70 (94%)
Frame = -2
Query: 541 MLDMNLLESLRTKPMFLGSKAQRKLERAVWNDTSFLASVDVMDYSLLVGVDEEKNELVLG 362
+LDMNLLE+LRT+P+FLGSKA+R LERA+WNDT+FLASVDVMDYSLLVG DEE+ ELVLG
Sbjct: 673 LLDMNLLETLRTEPIFLGSKAKRSLERAIWNDTNFLASVDVMDYSLLVGFDEERKELVLG 732
Query: 361 IIDYMRQYTW 332
IID+MRQYTW
Sbjct: 733 IIDFMRQYTW 742
Score = 103 bits (257), Expect(2) = 1e-52
Identities = 46/50 (92%), Positives = 50/50 (100%)
Frame = -3
Query: 327 KHLETWVKASGILGGPKNASPTIVSPKQYKKRFRKAMTTYFLTLPDPWSS 178
KHLETWVKASGILGGPKNASPTIVSPKQYK+RFRKAMTTYFLT+P+PW+S
Sbjct: 744 KHLETWVKASGILGGPKNASPTIVSPKQYKRRFRKAMTTYFLTVPEPWTS 793
>dbj|BAC24937.1| P0479C08.11 [Oryza sativa (japonica cultivar-group)]
Length = 1630
Score = 124 bits (310), Expect(2) = 5e-49
Identities = 57/70 (81%), Positives = 66/70 (93%)
Frame = -2
Query: 541 MLDMNLLESLRTKPMFLGSKAQRKLERAVWNDTSFLASVDVMDYSLLVGVDEEKNELVLG 362
+LD NLLE+L TKP+FLGSKA+R+LERAVWNDTSFLA+ DVMDYSLLVG+DEEK ELV+G
Sbjct: 1510 LLDSNLLEALHTKPIFLGSKAKRRLERAVWNDTSFLATADVMDYSLLVGIDEEKKELVIG 1569
Query: 361 IIDYMRQYTW 332
IIDY+RQYTW
Sbjct: 1570 IIDYLRQYTW 1579
Score = 92.4 bits (228), Expect(2) = 5e-49
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = -3
Query: 327 KHLETWVKASGILGGPKNASPTIVSPKQYKKRFRKAMTTYFLTLPDPWSS 178
K LETWVKASGILGGPKN SPT++SP QYKKRFRKAM+ YFLT+PD WSS
Sbjct: 1581 KQLETWVKASGILGGPKNESPTVISPMQYKKRFRKAMSKYFLTVPDQWSS 1630
>ref|NP_195050.1| putative protein; protein id: At4g33240.1 [Arabidopsis thaliana]
gi|7486447|pir||T05204 hypothetical protein F4I10.170 -
Arabidopsis thaliana gi|4455338|emb|CAB36798.1| putative
protein [Arabidopsis thaliana] gi|7270272|emb|CAB80041.1|
putative protein [Arabidopsis thaliana]
Length = 1757
Score = 118 bits (296), Expect(2) = 3e-47
Identities = 55/70 (78%), Positives = 65/70 (92%)
Frame = -2
Query: 541 MLDMNLLESLRTKPMFLGSKAQRKLERAVWNDTSFLASVDVMDYSLLVGVDEEKNELVLG 362
+LD NL+E++ T P+F+GSKA+R LERAVWNDTSFLAS+ VMDYSLLVGVDEE+NELVLG
Sbjct: 1608 LLDQNLVEAMPTSPIFVGSKAKRLLERAVWNDTSFLASIHVMDYSLLVGVDEERNELVLG 1667
Query: 361 IIDYMRQYTW 332
IID+MRQYTW
Sbjct: 1668 IIDFMRQYTW 1677
Score = 91.7 bits (226), Expect(2) = 3e-47
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = -3
Query: 327 KHLETWVKASGILGGPKNASPTIVSPKQYKKRFRKAMTTYFLTLPDPWS 181
KHLETWVK SG+LGGPKN++PT++SP+QYKKRFRKAMT YFL +PD WS
Sbjct: 1679 KHLETWVKTSGLLGGPKNSTPTVISPQQYKKRFRKAMTAYFLMVPDQWS 1727
>gb|AAK55470.1|AC084295_3 putative phosphoinositide kinase [Oryza sativa]
Length = 1702
Score = 114 bits (285), Expect(2) = 5e-46
Identities = 52/70 (74%), Positives = 65/70 (92%)
Frame = -2
Query: 541 MLDMNLLESLRTKPMFLGSKAQRKLERAVWNDTSFLASVDVMDYSLLVGVDEEKNELVLG 362
+LD NLLE++ T P+F+G+KA+R LERAVWNDT+FLAS+ VMDYSLLVGVDE+K+ELV+G
Sbjct: 1565 LLDQNLLEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIGVMDYSLLVGVDEKKHELVMG 1624
Query: 361 IIDYMRQYTW 332
IID+MRQYTW
Sbjct: 1625 IIDFMRQYTW 1634
Score = 92.0 bits (227), Expect(2) = 5e-46
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = -3
Query: 327 KHLETWVKASGILGGPKNASPTIVSPKQYKKRFRKAMTTYFLTLPDPWS 181
KHLETWVK SGILGGPKN +PT++SPKQYK RFRKAM+TYFL +PD WS
Sbjct: 1636 KHLETWVKTSGILGGPKNVAPTVISPKQYKMRFRKAMSTYFLVVPDQWS 1684
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 511,966,548
Number of Sequences: 1393205
Number of extensions: 11887530
Number of successful extensions: 29618
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 28494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29581
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
