Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000708A_C01 KMC000708A_c01
(617 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176551.1| kinesin-related protein; protein id: At1g63640.... 177 1e-43
gb|AAF19694.1|AC008047_1 F2K11.1 [Arabidopsis thaliana] 149 2e-35
ref|NP_198947.1| kinesin-related protein; protein id: At5g41310.... 124 1e-27
gb|AAG52083.1|AC012679_21 kinesin-related protein; 103921-99132 ... 100 2e-20
pir||B96766 protein kinesin F2P9.27 [imported] - Arabidopsis tha... 100 2e-20
>ref|NP_176551.1| kinesin-related protein; protein id: At1g63640.1 [Arabidopsis
thaliana] gi|25404429|pir||C96661 kinesin-like protein,
73641-79546 [imported] - Arabidopsis thaliana
gi|12324941|gb|AAG52420.1|AC011622_8 kinesin-like
protein; 73641-79546 [Arabidopsis thaliana]
Length = 1056
Score = 177 bits (448), Expect = 1e-43
Identities = 85/199 (42%), Positives = 140/199 (69%)
Frame = +2
Query: 20 KYQTKLNALEALAAGATEENEVVTMWVQQLKFTMQLEQTKFEEKKKLEEQDFSRLKKDKV 199
KY++++ LE+LAAG T+ENE+VT ++ +K LE+T+ EEK++ EE+D RL+K+K
Sbjct: 259 KYRSRIKVLESLAAGTTKENEIVTNCMEHIK----LEKTRIEEKERSEEKDVVRLRKEKE 314
Query: 200 RNEIEISALKQDLDMAKRTYEEHVSQLELQAAESKAEYEKRIVELKHQLADARKQVKDLE 379
R++ EI LKQ+L + K T+E +LE +A +++ E EK++ + + + D+ ++VK+LE
Sbjct: 315 RSDAEIRQLKQELKLVKETHENQCLELEAKAQKTRDELEKKLKDAELHVVDSSRKVKELE 374
Query: 380 AFSESRSLNWKHKEHTYQSFVNYQSKAFKESRGALKFVKNEVIKTRRGYLEEFKYFGMKL 559
+S+S W+ KE YQ+F++ S A +E +K+EV++T+R Y E+ Y+G+KL
Sbjct: 375 KLCQSKSQRWEKKECIYQNFIDNHSGALQELSATSLSIKHEVVRTQRKYFEDLNYYGLKL 434
Query: 560 KGLAEAAENYHVVLTENRK 616
KG+A+AA+NYHVVL ENR+
Sbjct: 435 KGVADAAKNYHVVLEENRR 453
>gb|AAF19694.1|AC008047_1 F2K11.1 [Arabidopsis thaliana]
Length = 1109
Score = 149 bits (377), Expect = 2e-35
Identities = 70/164 (42%), Positives = 115/164 (69%)
Frame = +2
Query: 125 LEQTKFEEKKKLEEQDFSRLKKDKVRNEIEISALKQDLDMAKRTYEEHVSQLELQAAESK 304
LE+T+ EEK++ EE+D RL+K+K R++ EI LKQ+L + K T+E +LE +A +++
Sbjct: 275 LEKTRIEEKERSEEKDVVRLRKEKERSDAEIRQLKQELKLVKETHENQCLELEAKAQKTR 334
Query: 305 AEYEKRIVELKHQLADARKQVKDLEAFSESRSLNWKHKEHTYQSFVNYQSKAFKESRGAL 484
E EK++ + + + D+ ++VK+LE +S+S W+ KE YQ+F++ S A +E
Sbjct: 335 DELEKKLKDAELHVVDSSRKVKELEKLCQSKSQRWEKKECIYQNFIDNHSGALQELSATS 394
Query: 485 KFVKNEVIKTRRGYLEEFKYFGMKLKGLAEAAENYHVVLTENRK 616
+K+EV++T+R Y E+ Y+G+KLKG+A+AA+NYHVVL ENR+
Sbjct: 395 LSIKHEVVRTQRKYFEDLNYYGLKLKGVADAAKNYHVVLEENRR 438
>ref|NP_198947.1| kinesin-related protein; protein id: At5g41310.1 [Arabidopsis
thaliana]
Length = 961
Score = 124 bits (310), Expect = 1e-27
Identities = 64/199 (32%), Positives = 117/199 (58%)
Frame = +2
Query: 20 KYQTKLNALEALAAGATEENEVVTMWVQQLKFTMQLEQTKFEEKKKLEEQDFSRLKKDKV 199
KY++++N LE LA+G T+ENEV +K+ +K K
Sbjct: 242 KYRSRINVLETLASGTTDENEV--------------------RRKRCAPN-----RKGKE 276
Query: 200 RNEIEISALKQDLDMAKRTYEEHVSQLELQAAESKAEYEKRIVELKHQLADARKQVKDLE 379
R+ E+S LKQ+L++ K T+E+ +L+L A ++K E E+++ + ++ +A K+LE
Sbjct: 277 RSNAELSKLKQELEIVKETHEKQFLELKLNAQKAKVELERQVKNSELRVVEA----KELE 332
Query: 380 AFSESRSLNWKHKEHTYQSFVNYQSKAFKESRGALKFVKNEVIKTRRGYLEEFKYFGMKL 559
E+++ W+ KE TY+ F+N+Q++A +E + +K++V+K Y + Y+G+KL
Sbjct: 333 KLCETKTKRWEKKEQTYKRFINHQTEALQELKATSMSLKHDVLKIGENYFLDLTYYGIKL 392
Query: 560 KGLAEAAENYHVVLTENRK 616
+G+A AA+NY +++ ENR+
Sbjct: 393 RGVAHAAKNYQIIIEENRR 411
>gb|AAG52083.1|AC012679_21 kinesin-related protein; 103921-99132 [Arabidopsis thaliana]
Length = 1050
Score = 100 bits (248), Expect = 2e-20
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
Frame = +2
Query: 104 QLKFTMQLEQTKFEEKKKLEEQDFSRLKKDKVRNEIEISALKQ---DLDMAKRTYEEHVS 274
Q++ + T E + K EQ+ + K E + L+Q + AK EE +
Sbjct: 342 QMESQTMVATTGLESRLKELEQEGKVVNTAKNALEERVKELEQMGKEAHSAKNALEEKIK 401
Query: 275 QLELQAAESKA---EYEKRIVELKHQLADARKQVKDLEAFSESRSLNWKHKEHTYQSFVN 445
QL+ E+K E +I EL+ L + +V+++E SES W KE +Y+SF++
Sbjct: 402 QLQQMEKETKTANTSLEGKIQELEQNLVMWKTKVREMEKKSESNHQRWSQKELSYKSFID 461
Query: 446 YQSKAFKESRGALKFVKNEVIKTRRGYLEEFKYFGMKLKGLAEAAENYHVVLTENRK 616
QS+A E R + +K E++K + Y ++F G KL L+ AAENYH VLTENRK
Sbjct: 462 NQSQALLELRSYSRSIKQEILKVQENYTDQFSQLGKKLIELSNAAENYHAVLTENRK 518
Score = 82.4 bits (202), Expect = 4e-15
Identities = 61/181 (33%), Positives = 97/181 (52%), Gaps = 9/181 (4%)
Frame = +2
Query: 20 KYQTKLNALEALAAGATEENEVVTMWVQQLKFTMQLEQTKFEEKKKLEEQDFSRLKKDKV 199
KYQ+++N LEALA+G E+E E++ +EEKKK EE+D +L K
Sbjct: 216 KYQSRINVLEALASGTGVEHET--------------EKSMWEEKKKHEEEDMVKLMKQND 261
Query: 200 RNEIEISALKQDLDMAKRTYEEHVSQLELQAAESKAEYEKRIVELKHQLADARKQVKDLE 379
++ +EISALKQ+L+ KR YE+ SQ+E Q +SK E +K K++ D K +K+ +
Sbjct: 262 QHNLEISALKQELETTKRKYEQQYSQIESQTKKSKWEEQK-----KNEEEDMDKLLKEND 316
Query: 380 AFSESRSLNWKHKEHTYQSFVNYQSKAFKESRGA-------LKFVKNE--VIKTRRGYLE 532
F+ S + E T +++ S+ ++ A LK ++ E V+ T + LE
Sbjct: 317 QFNLQISALRQELETTRKAYEQQCSQMESQTMVATTGLESRLKELEQEGKVVNTAKNALE 376
Query: 533 E 535
E
Sbjct: 377 E 377
>pir||B96766 protein kinesin F2P9.27 [imported] - Arabidopsis thaliana
gi|12325157|gb|AAG52533.1|AC016662_27 putative kinesin;
97201-101676 [Arabidopsis thaliana]
Length = 987
Score = 100 bits (248), Expect = 2e-20
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
Frame = +2
Query: 104 QLKFTMQLEQTKFEEKKKLEEQDFSRLKKDKVRNEIEISALKQ---DLDMAKRTYEEHVS 274
Q++ + T E + K EQ+ + K E + L+Q + AK EE +
Sbjct: 312 QMESQTMVATTGLESRLKELEQEGKVVNTAKNALEERVKELEQMGKEAHSAKNALEEKIK 371
Query: 275 QLELQAAESKA---EYEKRIVELKHQLADARKQVKDLEAFSESRSLNWKHKEHTYQSFVN 445
QL+ E+K E +I EL+ L + +V+++E SES W KE +Y+SF++
Sbjct: 372 QLQQMEKETKTANTSLEGKIQELEQNLVMWKTKVREMEKKSESNHQRWSQKELSYKSFID 431
Query: 446 YQSKAFKESRGALKFVKNEVIKTRRGYLEEFKYFGMKLKGLAEAAENYHVVLTENRK 616
QS+A E R + +K E++K + Y ++F G KL L+ AAENYH VLTENRK
Sbjct: 432 NQSQALLELRSYSRSIKQEILKVQENYTDQFSQLGKKLIELSNAAENYHAVLTENRK 488
Score = 82.0 bits (201), Expect = 6e-15
Identities = 59/181 (32%), Positives = 98/181 (53%), Gaps = 9/181 (4%)
Frame = +2
Query: 20 KYQTKLNALEALAAGATEENEVVTMWVQQLKFTMQLEQTKFEEKKKLEEQDFSRLKKDKV 199
KYQ+++N LEALA+G E+E E++ +EEKKK EE+D +L K
Sbjct: 184 KYQSRINVLEALASGTGVEHET--------------EKSMWEEKKKHEEEDMVKLMKQND 229
Query: 200 RNEIEISALKQDLDMAKRTYEEHVSQLELQAAESKAEYEKRIVELKHQLADARKQVKDLE 379
++ +EISALKQ+L+ KR YE+ SQ+E Q K+++E+ + K++ D K +K+ +
Sbjct: 230 QHNLEISALKQELETTKRKYEQQYSQIESQTKTEKSKWEE---QKKNEEEDMDKLLKEND 286
Query: 380 AFSESRSLNWKHKEHTYQSFVNYQSKAFKESRGA-------LKFVKNE--VIKTRRGYLE 532
F+ S + E T +++ S+ ++ A LK ++ E V+ T + LE
Sbjct: 287 QFNLQISALRQELETTRKAYEQQCSQMESQTMVATTGLESRLKELEQEGKVVNTAKNALE 346
Query: 533 E 535
E
Sbjct: 347 E 347
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 446,548,737
Number of Sequences: 1393205
Number of extensions: 8460765
Number of successful extensions: 38576
Number of sequences better than 10.0: 1507
Number of HSP's better than 10.0 without gapping: 34713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37974
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
