Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000574A_C01 KMC000574A_c01
(587 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_171917.1| unknown protein; protein id: At1g04210.1, suppo... 73 3e-12
gb|AAL31654.1|AC079179_9 Putative protein kinase [Oryza sativa] ... 36 0.41
ref|NP_732554.1| CG31421-PA [Drosophila melanogaster] gi|1736836... 34 1.2
dbj|BAC02704.1| KIAA1995 protein [Homo sapiens] 34 1.6
ref|NP_149107.2| NIMA related kinase 9; NIMA-related kinase Nek8... 34 1.6
>ref|NP_171917.1| unknown protein; protein id: At1g04210.1, supported by cDNA:
gi_20466531 [Arabidopsis thaliana] gi|7485872|pir||T00952
hypothetical protein F20D22.2 - Arabidopsis thaliana
gi|3142291|gb|AAC16742.1| Contains similarity to
adenylate cyclase gb|AF012921 from Magnaporthe grisae.
EST gb|Z24512 comes from this gene. [Arabidopsis
thaliana] gi|20466532|gb|AAM20583.1| unknown protein
[Arabidopsis thaliana]
Length = 1112
Score = 72.8 bits (177), Expect = 3e-12
Identities = 33/85 (38%), Positives = 58/85 (67%), Gaps = 2/85 (2%)
Frame = -1
Query: 584 PYYGVHDSLMHDSLQMGKRPQLTDELEALSSMNEP--TMIQSGEELEKSEVEIDTLKFLV 411
PY+ + + +H+SLQ GKRP+L +LE L S E + + E + +E ++DT++FL+
Sbjct: 1022 PYFDLSELQIHESLQNGKRPKLPKKLETLISETEEEESTNKLSEVFDLTESDLDTMRFLI 1081
Query: 410 DLFHSCMKENPNERPTAEEIHEMLV 336
D+FH C +E+P++R A ++HEM++
Sbjct: 1082 DVFHQCTEESPSDRLNAGDLHEMIL 1106
>gb|AAL31654.1|AC079179_9 Putative protein kinase [Oryza sativa]
gi|20042880|gb|AAM08708.1|AC116601_1 Putative protein
kinase [Oryza sativa]
Length = 1098
Score = 35.8 bits (81), Expect = 0.41
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = -1
Query: 539 MGKRPQLTDELEALSSMNEPTM----IQSGEELEKSEVEIDTLKFLVDLFHSCMKENPNE 372
+GK P+ D L+ L+S + + I L + E + + L+ + SC+K +P
Sbjct: 1006 IGKHPR--DLLQHLTSSRDHNITIKEILDSRPLAPTTTEEENIVSLIKVVFSCLKASPQA 1063
Query: 371 RPTAEEIHEMLVGH 330
RPT +E+++ L+ +
Sbjct: 1064 RPTMQEVYQTLIDY 1077
>ref|NP_732554.1| CG31421-PA [Drosophila melanogaster]
gi|17368362|sp|P83104|M3K7_DROME Putative
mitogen-activated protein kinase kinase kinase 7
gi|23171807|gb|AAN13830.1| CG31421-PA [Drosophila
melanogaster]
Length = 393
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/45 (37%), Positives = 24/45 (52%)
Frame = -1
Query: 473 IQSGEELEKSEVEIDTLKFLVDLFHSCMKENPNERPTAEEIHEML 339
I SGE+L V D + + L CM NP +RP+ +EI + L
Sbjct: 222 ISSGEKLPMEAVRSDCPEGIKQLMECCMDINPEKRPSMKEIEKFL 266
>dbj|BAC02704.1| KIAA1995 protein [Homo sapiens]
Length = 1011
Score = 33.9 bits (76), Expect = 1.6
Identities = 12/33 (36%), Positives = 25/33 (75%), Gaps = 3/33 (9%)
Frame = -1
Query: 440 VEIDTLKF---LVDLFHSCMKENPNERPTAEEI 351
+E+D+ ++ L+ + HSC+ ++P +RPTA+E+
Sbjct: 302 MEVDSSQYSLELIQMVHSCLDQDPEQRPTADEL 334
>ref|NP_149107.2| NIMA related kinase 9; NIMA-related kinase Nek8 [Homo sapiens]
gi|18997185|gb|AAL05428.1| NIMA-related kinase Nek8
[Homo sapiens]
Length = 979
Score = 33.9 bits (76), Expect = 1.6
Identities = 12/33 (36%), Positives = 25/33 (75%), Gaps = 3/33 (9%)
Frame = -1
Query: 440 VEIDTLKF---LVDLFHSCMKENPNERPTAEEI 351
+E+D+ ++ L+ + HSC+ ++P +RPTA+E+
Sbjct: 270 MEVDSSQYSLELIQMVHSCLDQDPEQRPTADEL 302
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 490,061,295
Number of Sequences: 1393205
Number of extensions: 9909571
Number of successful extensions: 23899
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 23053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23855
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
