Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000564A_C07 KMC000564A_c07
(1382 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_502630.1| Predicted CDS, 7TM receptor family member [Caen... 37 0.57
sp|Q9PTA6|PA2C_BUNMU Phospholipase A2, beta bungarotoxin A-AL3 c... 33 8.3
>ref|NP_502630.1| Predicted CDS, 7TM receptor family member [Caenorhabditis elegans]
gi|7495691|pir||T19091 hypothetical protein C08F11.4 -
Caenorhabditis elegans gi|3874183|emb|CAB05675.1| C.
elegans SRU-21 protein (corresponding sequence C08F11.4)
[Caenorhabditis elegans]
Length = 259
Score = 37.4 bits (85), Expect = 0.57
Identities = 22/75 (29%), Positives = 42/75 (55%)
Frame = +1
Query: 388 YHVYIAFNLYLIITTLQFLLTQPPFILLISKYFITIFITLRTTKFTFSFGNKRIDGITLY 567
+ + + FNL LI+ ++F L+ PP + ++ + I +TL T +FS+ + IT++
Sbjct: 147 FSICLGFNLVLIVKLIKFKLSVPPSMGSLASHRAEISLTLTTVSMSFSYLTNGM--ITVF 204
Query: 568 KYIFNIAREHVYLII 612
+FN +YLI+
Sbjct: 205 GRLFN--NLTIYLIV 217
>sp|Q9PTA6|PA2C_BUNMU Phospholipase A2, beta bungarotoxin A-AL3 chain precursor
(Phosphatidylcholine 2-acylhydrolase)
gi|6562011|emb|CAB62501.1| beta-bungarotoxin A chain
[Bungarus multicinctus]
Length = 138
Score = 33.5 bits (75), Expect = 8.3
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 1177 HINTEEFKALNRVLID*RRSLLAYWLYGCYKKRGGSG 1067
H+N +FK + R I ++ L Y YGCY GGSG
Sbjct: 17 HLNLYQFKEMIRYTIPCEKTWLEYTDYGCYCGYGGSG 53
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,083,518,676
Number of Sequences: 1393205
Number of extensions: 22192792
Number of successful extensions: 40012
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39994
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 90493486596
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
