Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000391A_C01 KMC000391A_c01
(472 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T05189 glutamyl aminopeptidase homolog F4I10.20 - Arabidops... 61 5e-09
ref|NP_195035.2| aminopeptidase- like protein; protein id: At4g3... 61 5e-09
gb|EAA10722.1| ebiP4374 [Anopheles gambiae str. PEST] 38 0.061
ref|NP_496210.1| ATPase Associated with diverse cellular Activit... 33 2.0
ref|NP_391851.1| alternate gene name: yxdE~myo-inositol cataboli... 32 2.6
>pir||T05189 glutamyl aminopeptidase homolog F4I10.20 - Arabidopsis thaliana
gi|4455323|emb|CAB36783.1| aminopeptidase-like protein
[Arabidopsis thaliana] gi|7270256|emb|CAB80026.1|
aminopeptidase-like protein [Arabidopsis thaliana]
Length = 873
Score = 61.2 bits (147), Expect = 5e-09
Identities = 29/74 (39%), Positives = 47/74 (63%)
Frame = -3
Query: 461 YGAGLLLTHFISPIVPLTHSNEEANGIEAFFASHANPSIIMNLNLSIEQIRIKARWIQSV 282
+G+G L+T FIS +V S E+A +E FFA+ + PS+ L SIE++ I A W++S+
Sbjct: 798 WGSGFLITRFISAVVSPFASFEKAKEVEEFFATRSKPSMARTLKQSIERVHINANWVESI 857
Query: 281 RLELSLPDLIKPLA 240
+ E +L L+ L+
Sbjct: 858 KKEDNLTQLVAQLS 871
>ref|NP_195035.2| aminopeptidase- like protein; protein id: At4g33090.1, supported by
cDNA: gi_17473510 [Arabidopsis thaliana]
gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20
[Arabidopsis thaliana] gi|24209879|gb|AAN41401.1|
aminopeptidase M [Arabidopsis thaliana]
gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20
[Arabidopsis thaliana]
Length = 879
Score = 61.2 bits (147), Expect = 5e-09
Identities = 29/74 (39%), Positives = 47/74 (63%)
Frame = -3
Query: 461 YGAGLLLTHFISPIVPLTHSNEEANGIEAFFASHANPSIIMNLNLSIEQIRIKARWIQSV 282
+G+G L+T FIS +V S E+A +E FFA+ + PS+ L SIE++ I A W++S+
Sbjct: 804 WGSGFLITRFISAVVSPFASFEKAKEVEEFFATRSKPSMARTLKQSIERVHINANWVESI 863
Query: 281 RLELSLPDLIKPLA 240
+ E +L L+ L+
Sbjct: 864 KKEDNLTQLVAQLS 877
>gb|EAA10722.1| ebiP4374 [Anopheles gambiae str. PEST]
Length = 809
Score = 37.7 bits (86), Expect = 0.061
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -3
Query: 470 LAKYGAGLLLTHFISPIVPLTHSNEEANGIEAFFASHANPSIIMNLNLSIEQIRIKARWI 291
L +Y G LL I + + E A +E FF H P ++ SIE IR+ A W+
Sbjct: 750 LNQYEGGFLLARLIKYLTENFSTEERAKEVEQFFREHDFPGTERTVSQSIETIRLNADWM 809
>ref|NP_496210.1| ATPase Associated with diverse cellular Activities [Caenorhabditis
elegans] gi|7504131|pir||T22612 hypothetical protein
F54B3.3 - Caenorhabditis elegans
gi|3877493|emb|CAA88471.1| Hypothetical protein F54B3.3
[Caenorhabditis elegans]
Length = 610
Score = 32.7 bits (73), Expect = 2.0
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -2
Query: 366 QSREPFHHHELELKH*ADPYQ-SKVDSECKARALSSRLNQTISSEEM 229
Q R+ HEL LKH Y+ K+D+E +ARA ++R N+ ++ E+M
Sbjct: 180 QLRKQTIEHELALKH---KYELEKIDAETRARAKAARDNRDVNLEQM 223
>ref|NP_391851.1| alternate gene name: yxdE~myo-inositol catabolism [Bacillus
subtilis] gi|1176989|sp|P42416|IOLE_BACSU IolE protein
gi|7451104|pir||E69645 myo-inositol catabolism iolE -
Bacillus subtilis gi|709985|dbj|BAA03294.1| hypothetical
protein [Bacillus subtilis] gi|2636518|emb|CAB16008.1|
iolE [Bacillus subtilis subsp. subtilis str. 168]
Length = 297
Score = 32.3 bits (72), Expect = 2.6
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = -3
Query: 470 LAKYGAGLLLTHFISPIVPLTHSNEEANGIEAFFASHANPSIIMNLNLSIEQIRIKARWI 291
+ + GAG L H +S IV E G FF A I+N L + +RI +W
Sbjct: 20 MPEIGAGNTLQHLLSDIVVARFQGTEVGG---FFPEPA----ILNKELKLRNLRIAGKWF 72
Query: 290 QSVRLELSLPDLIK 249
S L L + K
Sbjct: 73 SSFILRDGLGEAAK 86
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 372,117,486
Number of Sequences: 1393205
Number of extensions: 6868119
Number of successful extensions: 13900
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 13700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13899
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12524054526
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
