Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000288A_C01 KMC000288A_c01
(529 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA67130.1| acetyl-CoA synthetase [Solanum tuberosum] 199 1e-50
emb|CAD40664.1| OSJNBb0118P14.2 [Oryza sativa (japonica cultivar... 198 4e-50
ref|NP_198504.1| acetyl-CoA synthetase; protein id: At5g36880.1,... 197 8e-50
gb|AAB92552.1| acetyl-CoA synthetase [Arabidopsis thaliana] 197 8e-50
gb|AAM22752.1| acetyl CoA synthetase [Deschampsia antarctica] 194 4e-49
>emb|CAA67130.1| acetyl-CoA synthetase [Solanum tuberosum]
Length = 631
Score = 199 bits (507), Expect = 1e-50
Identities = 99/114 (86%), Positives = 107/114 (93%)
Frame = -1
Query: 529 ESALVSHPQCAEAAVFVLEHEVKGQGIYAFVTLVEGVPYSEELRKNLILTVRKQIGAFAA 350
ESALVSHPQCAEAAV +EHEVKGQGIYAFVTLVEGVPYS++LRK+L++ VR QIGAFAA
Sbjct: 517 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSDDLRKSLVMVVRNQIGAFAA 576
Query: 349 PDKIHWAPALPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELSD 188
PDKIHWAP LPKTRSGKIMRRILRKIASRQLDELGDTSTLADP VV+QLI L+D
Sbjct: 577 PDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPTVVDQLIALAD 630
>emb|CAD40664.1| OSJNBb0118P14.2 [Oryza sativa (japonica cultivar-group)]
Length = 697
Score = 198 bits (503), Expect = 4e-50
Identities = 97/115 (84%), Positives = 109/115 (94%)
Frame = -1
Query: 529 ESALVSHPQCAEAAVFVLEHEVKGQGIYAFVTLVEGVPYSEELRKNLILTVRKQIGAFAA 350
ESALVSHP+CAEAAV ++HEVKGQGIYAFVTLV+GVPYS+ELRK+L++TVR QIGAFAA
Sbjct: 583 ESALVSHPKCAEAAVVGIDHEVKGQGIYAFVTLVDGVPYSDELRKSLVMTVRSQIGAFAA 642
Query: 349 PDKIHWAPALPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELSDA 185
PDKIHWAP LPKTRSGKIMRRILRKIASRQLDELGDTSTLA+P VV+QLI L+D+
Sbjct: 643 PDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLAEPGVVDQLIALADS 697
>ref|NP_198504.1| acetyl-CoA synthetase; protein id: At5g36880.1, supported by cDNA:
gi_15028046, supported by cDNA: gi_2708623 [Arabidopsis
thaliana] gi|8953708|dbj|BAA98066.1| acetyl-CoA
synthetase [Arabidopsis thaliana]
gi|15028047|gb|AAK76554.1| putative acetyl-CoA
synthetase [Arabidopsis thaliana]
gi|26983904|gb|AAN86204.1| putative acetyl-CoA
synthetase [Arabidopsis thaliana]
Length = 693
Score = 197 bits (500), Expect = 8e-50
Identities = 98/114 (85%), Positives = 107/114 (92%)
Frame = -1
Query: 529 ESALVSHPQCAEAAVFVLEHEVKGQGIYAFVTLVEGVPYSEELRKNLILTVRKQIGAFAA 350
ESALV HPQCAEAAV +EHEVKGQGIYAFVTL+EGVPYSEELRK+L+L VR QIGAFAA
Sbjct: 579 ESALVLHPQCAEAAVVGIEHEVKGQGIYAFVTLLEGVPYSEELRKSLVLMVRNQIGAFAA 638
Query: 349 PDKIHWAPALPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELSD 188
PD+IHWAP LPKTRSGKIMRRILRKIASRQL+ELGDTSTLADP+VV+QLI L+D
Sbjct: 639 PDRIHWAPGLPKTRSGKIMRRILRKIASRQLEELGDTSTLADPSVVDQLIALAD 692
>gb|AAB92552.1| acetyl-CoA synthetase [Arabidopsis thaliana]
Length = 693
Score = 197 bits (500), Expect = 8e-50
Identities = 98/114 (85%), Positives = 107/114 (92%)
Frame = -1
Query: 529 ESALVSHPQCAEAAVFVLEHEVKGQGIYAFVTLVEGVPYSEELRKNLILTVRKQIGAFAA 350
ESALV HPQCAEAAV +EHEVKGQGIYAFVTL+EGVPYSEELRK+L+L VR QIGAFAA
Sbjct: 579 ESALVLHPQCAEAAVVGIEHEVKGQGIYAFVTLLEGVPYSEELRKSLVLMVRNQIGAFAA 638
Query: 349 PDKIHWAPALPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELSD 188
PD+IHWAP LPKTRSGKIMRRILRKIASRQL+ELGDTSTLADP+VV+QLI L+D
Sbjct: 639 PDRIHWAPGLPKTRSGKIMRRILRKIASRQLEELGDTSTLADPSVVDQLIALAD 692
>gb|AAM22752.1| acetyl CoA synthetase [Deschampsia antarctica]
Length = 232
Score = 194 bits (494), Expect = 4e-49
Identities = 98/114 (85%), Positives = 104/114 (90%)
Frame = -1
Query: 529 ESALVSHPQCAEAAVFVLEHEVKGQGIYAFVTLVEGVPYSEELRKNLILTVRKQIGAFAA 350
ESALVSHPQCAEAAV +EHEVKGQGIYAFVTLV+GVPYSEELRK+LI VR QIGAFAA
Sbjct: 118 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVDGVPYSEELRKSLIAKVRNQIGAFAA 177
Query: 349 PDKIHWAPALPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELSD 188
PDKIHWAP LPKTRSGKIMRRILRKIA++QLDELGD STLADP VV+QLI L D
Sbjct: 178 PDKIHWAPGLPKTRSGKIMRRILRKIAAKQLDELGDISTLADPGVVDQLIALKD 231
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 443,411,687
Number of Sequences: 1393205
Number of extensions: 9197011
Number of successful extensions: 26267
Number of sequences better than 10.0: 926
Number of HSP's better than 10.0 without gapping: 24809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25824
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
