Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000286A_C01 KMC000286A_c01
(550 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A86255 hypothetical protein [imported] - Arabidopsis thalia... 234 4e-61
ref|NP_172664.1| putative pyrophosphate-fructose-6-phosphate 1-p... 234 4e-61
sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosp... 230 1e-59
ref|NP_192313.1| putative phosphofructokinase beta subunit; prot... 229 2e-59
gb|AAC67586.1| pyrophosphate-dependent phosphofructokinase beta ... 224 4e-58
>pir||A86255 hypothetical protein [imported] - Arabidopsis thaliana
gi|3157931|gb|AAC17614.1| Similar to
pyrophosphate-dependent phosphofuctokinase beta subunit
gb|Z32850 from Ricinus communis. ESTs gb|N65773,
gb|N64925 and gb|F15232 come from this gene.
[Arabidopsis thaliana]
Length = 574
Score = 234 bits (598), Expect = 4e-61
Identities = 112/124 (90%), Positives = 118/124 (94%)
Frame = -3
Query: 548 EGRCVLPTNFDSTYCYALGYGAGALLRFGKTGLISSVGNLCAPVEEWTVGGTALTSLMDV 369
EGRC LPTNFD+TYCYALGYGAG LL GKTGLISSVGNL APVEEWTVGGTALT+LMDV
Sbjct: 449 EGRCGLPTNFDATYCYALGYGAGVLLNSGKTGLISSVGNLAAPVEEWTVGGTALTALMDV 508
Query: 368 ERRHGKFKPVIKKAMVELDGAPFKKFASLRDEWALKNRYISPGPIPFTGPGSDAISHTLL 189
ERRHGKFKPVIKKAMVEL+GAPFKKFASLR+EWALKNRYISPGPI FTGPGSD++SHTLL
Sbjct: 509 ERRHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYISPGPIQFTGPGSDSLSHTLL 568
Query: 188 LELG 177
LELG
Sbjct: 569 LELG 572
>ref|NP_172664.1| putative pyrophosphate-fructose-6-phosphate 1-phosphotransferase;
protein id: At1g12000.1, supported by cDNA: gi_17064793,
supported by cDNA: gi_20259823 [Arabidopsis thaliana]
gi|17064794|gb|AAL32551.1| Similar to
pyrophosphate-dependent phosphofuctokinase beta subunit
[Arabidopsis thaliana] gi|20259824|gb|AAM13259.1|
similar to pyrophosphate-dependent phosphofuctokinase
beta subunit [Arabidopsis thaliana]
Length = 566
Score = 234 bits (598), Expect = 4e-61
Identities = 112/124 (90%), Positives = 118/124 (94%)
Frame = -3
Query: 548 EGRCVLPTNFDSTYCYALGYGAGALLRFGKTGLISSVGNLCAPVEEWTVGGTALTSLMDV 369
EGRC LPTNFD+TYCYALGYGAG LL GKTGLISSVGNL APVEEWTVGGTALT+LMDV
Sbjct: 441 EGRCGLPTNFDATYCYALGYGAGVLLNSGKTGLISSVGNLAAPVEEWTVGGTALTALMDV 500
Query: 368 ERRHGKFKPVIKKAMVELDGAPFKKFASLRDEWALKNRYISPGPIPFTGPGSDAISHTLL 189
ERRHGKFKPVIKKAMVEL+GAPFKKFASLR+EWALKNRYISPGPI FTGPGSD++SHTLL
Sbjct: 501 ERRHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYISPGPIQFTGPGSDSLSHTLL 560
Query: 188 LELG 177
LELG
Sbjct: 561 LELG 564
>sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta
subunit (PFP) (6-phosphofructokinase,
pyrophosphate-dependent) (Pyrophosphate-dependent
6-phosphofructose-1-kinase) (PPI-PFK)
gi|7447688|pir||T10107 diphosphate-fructose-6-phosphate
1-phosphotransferase (EC 2.7.1.90) beta chain - castor
bean gi|483536|emb|CAA83683.1| pyrophosphate-dependent
phosphofructokinase beta subunit [Ricinus communis]
Length = 552
Score = 230 bits (586), Expect = 1e-59
Identities = 112/124 (90%), Positives = 115/124 (92%)
Frame = -3
Query: 548 EGRCVLPTNFDSTYCYALGYGAGALLRFGKTGLISSVGNLCAPVEEWTVGGTALTSLMDV 369
EGRC LPTNFDSTYCYALGY AGALL GKTGLISSVGNL APV EWTVGGTALTSLMDV
Sbjct: 426 EGRCGLPTNFDSTYCYALGYAAGALLHSGKTGLISSVGNLGAPVAEWTVGGTALTSLMDV 485
Query: 368 ERRHGKFKPVIKKAMVELDGAPFKKFASLRDEWALKNRYISPGPIPFTGPGSDAISHTLL 189
ERRHGKFKPVIKKAMVEL+GAPFKKFASLR+EWALKNRY+SPGPI F GPGSDA SHTLL
Sbjct: 486 ERRHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYVSPGPIQFMGPGSDAASHTLL 545
Query: 188 LELG 177
LELG
Sbjct: 546 LELG 549
>ref|NP_192313.1| putative phosphofructokinase beta subunit; protein id: At4g04040.1
[Arabidopsis thaliana] gi|7447689|pir||T01470
diphosphate-fructose-6-phosphate 1-phosphotransferase
(EC 2.7.1.90) beta chain - Arabidopsis thaliana
gi|3377841|gb|AAC28214.1| contains similarity to
phosphofructokinases (Pfam; PFK.hmm, score; 36.60)
[Arabidopsis thaliana] gi|7267160|emb|CAB77872.1|
putative phosphofructokinase beta subunit [Arabidopsis
thaliana]
Length = 583
Score = 229 bits (584), Expect = 2e-59
Identities = 110/124 (88%), Positives = 117/124 (93%)
Frame = -3
Query: 548 EGRCVLPTNFDSTYCYALGYGAGALLRFGKTGLISSVGNLCAPVEEWTVGGTALTSLMDV 369
EGRC LPTNFD+TYCYALGYGAG+LL+ GKTGLISSVGNL APVEEWTVGGTALTSLMDV
Sbjct: 457 EGRCGLPTNFDATYCYALGYGAGSLLQSGKTGLISSVGNLAAPVEEWTVGGTALTSLMDV 516
Query: 368 ERRHGKFKPVIKKAMVELDGAPFKKFASLRDEWALKNRYISPGPIPFTGPGSDAISHTLL 189
ERRHGKFKPVIKKAMVEL+GAPFKKFAS R+EWALKNRYISPGPI F GPGSDA +HTL+
Sbjct: 517 ERRHGKFKPVIKKAMVELEGAPFKKFASQREEWALKNRYISPGPIQFKGPGSDARNHTLM 576
Query: 188 LELG 177
LELG
Sbjct: 577 LELG 580
>gb|AAC67586.1| pyrophosphate-dependent phosphofructokinase beta subunit [Citrus x
paradisi]
Length = 566
Score = 224 bits (572), Expect = 4e-58
Identities = 107/127 (84%), Positives = 113/127 (88%)
Frame = -3
Query: 548 EGRCVLPTNFDSTYCYALGYGAGALLRFGKTGLISSVGNLCAPVEEWTVGGTALTSLMDV 369
EGRC LPTNFD+TYCYALGYGAGALL GKTGLISSVGNL APVEEWTV GTALT+LMDV
Sbjct: 440 EGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVSGTALTALMDV 499
Query: 368 ERRHGKFKPVIKKAMVELDGAPFKKFASLRDEWALKNRYISPGPIPFTGPGSDAISHTLL 189
ERRHGKFKPVIKKAMVELDG PFKKF S+RDEWAL NRYISPGPI FTGP S ++HTLL
Sbjct: 500 ERRHGKFKPVIKKAMVELDGTPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNHTLL 559
Query: 188 LELGGDI 168
LELG +
Sbjct: 560 LELGAQV 566
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 484,979,682
Number of Sequences: 1393205
Number of extensions: 10733821
Number of successful extensions: 32585
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 31659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32557
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
