Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000283A_C01 KMC000283A_c01
(521 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO50942.1| hypothetical protein [Dictyostelium discoideum] 31 9.9
ref|NP_700624.1| methionine aminopeptidase, putative [Plasmodium... 31 9.9
>gb|AAO50942.1| hypothetical protein [Dictyostelium discoideum]
Length = 460
Score = 30.8 bits (68), Expect = 9.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 343 SNSNNQSEMNNLQTPKISVQTLFPG 417
SN+NN S NNLQ K VQ+ F G
Sbjct: 384 SNNNNNSTPNNLQVKKSKVQSFFKG 408
>ref|NP_700624.1| methionine aminopeptidase, putative [Plasmodium falciparum 3D7]
gi|23495015|gb|AAN35348.1|AE014831_24 methionine
aminopeptidase, putative [Plasmodium falciparum 3D7]
Length = 517
Score = 30.8 bits (68), Expect = 9.9
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 286 HIKQHNYCTKESSWH*S*PSNSNNQSEMNNLQT 384
H+K YC KE+S + +N+NN + NNL T
Sbjct: 68 HVKNDEYCNKENSNN----NNNNNNNNNNNLDT 96
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 415,893,976
Number of Sequences: 1393205
Number of extensions: 8136970
Number of successful extensions: 14597
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14583
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)