Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000273A_C01 KMC000273A_c01
(552 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM20148.1| unknown protein [Arabidopsis thaliana] 139 2e-32
ref|NP_193817.1| putative protein; protein id: At4g20850.1 [Arab... 139 2e-32
gb|AAL27553.1|AF420408_1 hypothetical protein [Musa acuminata] 129 2e-29
gb|AAA63263.1| tripeptidyl peptidase II 47 2e-04
ref|NP_033444.1| tripeptidyl peptidase II [Mus musculus] gi|2499... 47 2e-04
>gb|AAM20148.1| unknown protein [Arabidopsis thaliana]
Length = 1346
Score = 139 bits (351), Expect = 2e-32
Identities = 67/92 (72%), Positives = 75/92 (80%)
Frame = -2
Query: 545 DSFEENFQELRKWVDVKSPKYGILLVTRERRSQRLGTALKVLCDIIQDDAEPAKKKFYEL 366
D FEENF+EL KWVDVKS KYG L V RE+R RLGTALKVL D+IQ++ E A KK YEL
Sbjct: 1255 DKFEENFKELTKWVDVKSSKYGTLTVLREKRLSRLGTALKVLDDLIQNENETANKKLYEL 1314
Query: 365 KLSLLDEIGWTHLATYERQWMLVRFPPSLPLF 270
KL LL+EIGW+HL TYE+QWM VRFP SLPLF
Sbjct: 1315 KLDLLEEIGWSHLVTYEKQWMQVRFPKSLPLF 1346
>ref|NP_193817.1| putative protein; protein id: At4g20850.1 [Arabidopsis thaliana]
gi|7486967|pir||T10627 hypothetical protein T13K14.10 -
Arabidopsis thaliana gi|5262775|emb|CAB45880.1| putative
protein [Arabidopsis thaliana] gi|7268881|emb|CAB79085.1|
putative protein [Arabidopsis thaliana]
Length = 1396
Score = 139 bits (351), Expect = 2e-32
Identities = 67/92 (72%), Positives = 75/92 (80%)
Frame = -2
Query: 545 DSFEENFQELRKWVDVKSPKYGILLVTRERRSQRLGTALKVLCDIIQDDAEPAKKKFYEL 366
D FEENF+EL KWVDVKS KYG L V RE+R RLGTALKVL D+IQ++ E A KK YEL
Sbjct: 1305 DKFEENFKELTKWVDVKSSKYGTLTVLREKRLSRLGTALKVLDDLIQNENETANKKLYEL 1364
Query: 365 KLSLLDEIGWTHLATYERQWMLVRFPPSLPLF 270
KL LL+EIGW+HL TYE+QWM VRFP SLPLF
Sbjct: 1365 KLDLLEEIGWSHLVTYEKQWMQVRFPKSLPLF 1396
>gb|AAL27553.1|AF420408_1 hypothetical protein [Musa acuminata]
Length = 234
Score = 129 bits (324), Expect = 2e-29
Identities = 60/87 (68%), Positives = 71/87 (80%)
Frame = -2
Query: 548 PDSFEENFQELRKWVDVKSPKYGILLVTRERRSQRLGTALKVLCDIIQDDAEPAKKKFYE 369
PD FEE +EL+KWVD+KS KY +LLV RERR RLGTALKVL ++I +AEP KKK Y+
Sbjct: 147 PDIFEETLKELKKWVDIKSTKYCMLLVVRERRCGRLGTALKVLTNMIDGEAEPPKKKLYD 206
Query: 368 LKLSLLDEIGWTHLATYERQWMLVRFP 288
LK+ LLD+IGWTH+A YERQWM VRFP
Sbjct: 207 LKIQLLDQIGWTHVAVYERQWMPVRFP 233
>gb|AAA63263.1| tripeptidyl peptidase II
Length = 1194
Score = 46.6 bits (109), Expect = 2e-04
Identities = 24/92 (26%), Positives = 43/92 (46%)
Frame = -2
Query: 545 DSFEENFQELRKWVDVKSPKYGILLVTRERRSQRLGTALKVLCDIIQDDAEPAKKKFYEL 366
DS E F E KW D+ K ++ G LK ++++ +P K+ +
Sbjct: 1106 DSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLKFATKLVEE--KPTKENWKNC 1163
Query: 365 KLSLLDEIGWTHLATYERQWMLVRFPPSLPLF 270
+ L+ +GWTH A++ W+ + +PP +F
Sbjct: 1164 -IQLMKLLGWTHCASFTENWLPIMYPPDYCVF 1194
>ref|NP_033444.1| tripeptidyl peptidase II [Mus musculus]
gi|2499872|sp|Q64514|TPP2_MOUSE Tripeptidyl-peptidase II
(TPP-II) (Tripeptidyl aminopeptidase)
gi|2137836|pir||I48855 tripeptidyl-peptidase II (EC
3.4.14.10) - mouse gi|575955|emb|CAA57103.1|
tripeptidyl-peptidase ii [Mus musculus]
Length = 1262
Score = 46.6 bits (109), Expect = 2e-04
Identities = 23/92 (25%), Positives = 44/92 (47%)
Frame = -2
Query: 545 DSFEENFQELRKWVDVKSPKYGILLVTRERRSQRLGTALKVLCDIIQDDAEPAKKKFYEL 366
+S E + E KW D+ K I ++ G LK ++++ +P K+ +
Sbjct: 1174 ESLSETYWETTKWTDLFDTKVLIFAYKHALVNKMYGRGLKFATKLVEE--KPTKENWKNC 1231
Query: 365 KLSLLDEIGWTHLATYERQWMLVRFPPSLPLF 270
+ L+ +GWTH A++ W+ + +PP +F
Sbjct: 1232 -IQLMKLLGWTHCASFTENWLPIMYPPDYCVF 1262
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 469,186,539
Number of Sequences: 1393205
Number of extensions: 9796568
Number of successful extensions: 18761
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 18349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18760
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
