Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000271A_C01 KMC000271A_c01
(636 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA06306.1| CaM-1 [Nicotiana plumbaginifolia] gi|3378654|emb... 232 4e-60
sp|P04353|CALM_SPIOL Calmodulin gi|71685|pir||MCSP calmodulin - ... 232 4e-60
sp|P17928|CALM_MEDSA Calmodulin gi|71683|pir||MCAA calmodulin - ... 232 4e-60
ref|NP_189967.1| calmodulin 7; protein id: At3g43810.1, supporte... 232 4e-60
emb|CAA46150.1| calmodulin [Oryza sativa] gi|3336950|emb|CAA7430... 232 4e-60
>emb|CAA06306.1| CaM-1 [Nicotiana plumbaginifolia] gi|3378654|emb|CAA06307.1| CaM-2
[Nicotiana plumbaginifolia]
Length = 122
Score = 232 bits (591), Expect = 4e-60
Identities = 116/116 (100%), Positives = 116/116 (100%)
Frame = -2
Query: 635 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 456
GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF
Sbjct: 7 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 66
Query: 455 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 288
DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 67 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 122
Score = 45.8 bits (107), Expect = 5e-04
Identities = 21/49 (42%), Positives = 32/49 (64%)
Frame = -2
Query: 434 ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 288
I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+ +M K
Sbjct: 1 ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 49
>sp|P04353|CALM_SPIOL Calmodulin gi|71685|pir||MCSP calmodulin - spinach (tentative
sequence)
Length = 148
Score = 232 bits (591), Expect = 4e-60
Identities = 116/116 (100%), Positives = 116/116 (100%)
Frame = -2
Query: 635 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 456
GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF
Sbjct: 33 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 92
Query: 455 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 288
DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 93 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 148
Score = 65.5 bits (158), Expect = 6e-10
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = -2
Query: 482 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 303
E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D DG+G I++ EF+
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 302 VMMAK 288
+M K
Sbjct: 71 LMARK 75
>sp|P17928|CALM_MEDSA Calmodulin gi|71683|pir||MCAA calmodulin - alfalfa
gi|19579|emb|CAA36644.1| calmodulin (AA 1-149) [Medicago
sativa] gi|170070|gb|AAA34013.1| calmodulin
gi|170074|gb|AAA34014.1| calmodulin
gi|506852|gb|AAA34238.1| calmodulin [Vigna radiata]
gi|4103957|gb|AAD10244.1| calmodulin [Phaseolus
vulgaris] gi|21913287|gb|AAM81203.1|AF494220_1
calmodulin 2 [Medicago truncatula]
gi|1583767|prf||2121384A calmodulin
gi|1583769|prf||2121384C calmodulin
Length = 149
Score = 232 bits (591), Expect = 4e-60
Identities = 116/116 (100%), Positives = 116/116 (100%)
Frame = -2
Query: 635 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 456
GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 93
Query: 455 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 288
DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
Score = 66.2 bits (160), Expect = 3e-10
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = -2
Query: 518 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 339
MA ++ D + E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 338 GDGQINYEEFVKVMMAK 288
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
>ref|NP_189967.1| calmodulin 7; protein id: At3g43810.1, supported by cDNA: 7008.,
supported by cDNA: gi_5825597 [Arabidopsis thaliana]
gi|115484|sp|P27162|CAL1_PETHY Calmodulin 1
gi|27805429|sp|P59220|CAL7_ARATH Calmodulin-7
gi|71684|pir||MCPZDC calmodulin - carrot
gi|478632|pir||S22971 calmodulin - trumpet lily
gi|541839|pir||S40301 calmodulin - red bryony
gi|2129970|pir||S70768 calmodulin CAM81 - garden petunia
gi|11276996|pir||T47417 calmodulin 7 [similarity] -
Arabidopsis thaliana gi|18326|emb|CAA42423.1| calmodulin
[Daucus carota] gi|19447|emb|CAA78301.1| calmodulin
[Lilium longiflorum] gi|169207|gb|AAA33706.1| calmodulin
gi|308900|gb|AAA33397.1| calmodulin
gi|505154|emb|CAA43143.1| Calmodulin [Malus x domestica]
gi|535444|gb|AAA92681.1| calmodulin
gi|5825598|gb|AAD53313.1|AF178073_1 calmodulin 7
[Arabidopsis thaliana] gi|7362781|emb|CAB83153.1|
calmodulin 7 [Arabidopsis thaliana]
gi|9992891|gb|AAG11418.1|AF292108_1 calmodulin [Prunus
avium] gi|11036952|gb|AAG27432.1| calmodulin [Elaeis
guineensis] gi|14625405|dbj|BAB61909.1| calmodulin
NtCaM3 [Nicotiana tabacum] gi|14625407|dbj|BAB61910.1|
calmodulin NtCaM4 [Nicotiana tabacum]
gi|14625409|dbj|BAB61911.1| calmodulin NtCaM5 [Nicotiana
tabacum] gi|14625411|dbj|BAB61912.1| calmodulin NtCaM6
[Nicotiana tabacum] gi|14625413|dbj|BAB61913.1|
calmodulin NtCaM7 [Nicotiana tabacum]
gi|14625415|dbj|BAB61914.1| calmodulin NtCaM8 [Nicotiana
tabacum] gi|14625421|dbj|BAB61917.1| calmodulin NtCaM11
[Nicotiana tabacum] gi|14625423|dbj|BAB61918.1|
calmodulin NtCaM12 [Nicotiana tabacum]
gi|21594484|gb|AAM66013.1| calmodulin 7 [Arabidopsis
thaliana] gi|21913285|gb|AAM81202.1|AF494219_1
calmodulin 1 [Medicago truncatula]
gi|445602|prf||1909349A calmodulin
Length = 149
Score = 232 bits (591), Expect = 4e-60
Identities = 116/116 (100%), Positives = 116/116 (100%)
Frame = -2
Query: 635 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 456
GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 93
Query: 455 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 288
DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
Score = 67.8 bits (164), Expect = 1e-10
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = -2
Query: 518 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 339
MA ++ D D E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 338 GDGQINYEEFVKVMMAK 288
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
>emb|CAA46150.1| calmodulin [Oryza sativa] gi|3336950|emb|CAA74307.1| calmodulin
[Zea mays] gi|4103961|gb|AAD10246.1| calmodulin
[Phaseolus vulgaris]
Length = 149
Score = 232 bits (591), Expect = 4e-60
Identities = 116/116 (100%), Positives = 116/116 (100%)
Frame = -2
Query: 635 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 456
GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF
Sbjct: 34 GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVF 93
Query: 455 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 288
DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
Score = 65.9 bits (159), Expect = 4e-10
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = -2
Query: 518 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 339
MA ++ D + E KEAF +FDKD +G I+ EL VM +LG+ T+ E+ +MI E D D
Sbjct: 1 MADQLTD-EQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 338 GDGQINYEEFVKVMMAK 288
G+G I++ EF+ +M K
Sbjct: 60 GNGTIDFPEFLNLMARK 76
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 519,645,242
Number of Sequences: 1393205
Number of extensions: 11232350
Number of successful extensions: 51754
Number of sequences better than 10.0: 2418
Number of HSP's better than 10.0 without gapping: 39286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47261
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
