Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000260A_C05 KMC000260A_c05
(1251 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC78479.1| 3-oxoacyl-[acyl-carrier-protein] synthase [Capsic... 143 9e-36
gb|AAF61730.1|AF243182_1 beta-ketoacyl-ACP synthetase I [Glycine... 131 8e-33
gb|AAF61731.1|AF243183_1 beta-ketoacyl-ACP synthetase I-2 [Glyci... 131 8e-33
gb|AAC04691.1| beta-ketoacyl-ACP synthase I [Perilla frutescens] 125 7e-31
pir||T10061 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.... 125 7e-31
>gb|AAC78479.1| 3-oxoacyl-[acyl-carrier-protein] synthase [Capsicum chinense]
Length = 488
Score = 143 bits (361), Expect(2) = 9e-36
Identities = 89/167 (53%), Positives = 109/167 (64%), Gaps = 13/167 (7%)
Frame = -1
Query: 1251 DGFVLDEGSGVLVMESVESATKREAQILARYLEGAITCDARHMTNPRSDGLKLG--FLMK 1078
DGFV+ EGSGVLVME++E A KR A I+A YL GAITCDA H+T+PR+DGL + +M
Sbjct: 303 DGFVIGEGSGVLVMENLEHALKRGAPIIAEYLGGAITCDAHHITDPRADGLGVSSCIVMS 362
Query: 1077 S**ILLCTGDLYRCSCH----LAGDLAEVNAITPVCMDTS*LKMNATNSMI-------GV 931
+ ++ + H LAGDLAEVNAI V DTS +KMN T SMI G
Sbjct: 363 LVDAGVSPEEVNYINAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTKSMIGHGLGASGG 422
Query: 930 LSFWWFVS*AMTTGWMHRTINQDNLADDVTIDTVPDVKKQPEVNVGV 790
L + A+TTGW+H TINQ +L VTIDTVP+VKKQ EVNVG+
Sbjct: 423 LEAIATIK-AITTGWLHPTINQYDLEPQVTIDTVPNVKKQHEVNVGI 468
Score = 30.4 bits (67), Expect(2) = 9e-36
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 724 LSAAFSNSFGFGGHNSAI 671
++ SNSFGFGGHNS +
Sbjct: 464 VNVGISNSFGFGGHNSVV 481
>gb|AAF61730.1|AF243182_1 beta-ketoacyl-ACP synthetase I [Glycine max]
Length = 469
Score = 131 bits (329), Expect(2) = 8e-33
Identities = 85/169 (50%), Positives = 106/169 (62%), Gaps = 15/169 (8%)
Frame = -1
Query: 1251 DGFVLDEGSGVLVMESVESATKREAQILARYLEGAITCDARHMTNPRSDGLKLGFLMKS* 1072
DGFV+ EG+GVLVMES+E A KR A I+A YL GA+ CDA HMT+PRSDGL + ++S
Sbjct: 284 DGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRSDGLGVSTCIQS- 342
Query: 1071 *ILLCTG----DLYRCSCH----LAGDLAEVNAITPVCMDTS*LKMNATNSMI------- 937
L G ++ + H LAGDLAE+NAI V DTS +K+NAT SMI
Sbjct: 343 -SLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKDTSGIKINATKSMIGHCLGAA 401
Query: 936 GVLSFWWFVS*AMTTGWMHRTINQDNLADDVTIDTVPDVKKQPEVNVGV 790
G L V A+TTGW+H TINQ N V DTV +VK+Q E+NV +
Sbjct: 402 GGLEAIATVK-AITTGWLHPTINQFNPEPAVDFDTVANVKQQHEINVAI 449
Score = 32.7 bits (73), Expect(2) = 8e-33
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3
Query: 724 LSAAFSNSFGFGGHNSAIS 668
++ A SNSFGFGGHNS ++
Sbjct: 445 INVAISNSFGFGGHNSVVA 463
>gb|AAF61731.1|AF243183_1 beta-ketoacyl-ACP synthetase I-2 [Glycine max]
Length = 469
Score = 131 bits (329), Expect(2) = 8e-33
Identities = 85/169 (50%), Positives = 106/169 (62%), Gaps = 15/169 (8%)
Frame = -1
Query: 1251 DGFVLDEGSGVLVMESVESATKREAQILARYLEGAITCDARHMTNPRSDGLKLGFLMKS* 1072
DGFV+ EG+GVLVMES+E A KR A I+A YL GA+ CDA HMT+PRSDGL + ++S
Sbjct: 284 DGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRSDGLGVSTCIQS- 342
Query: 1071 *ILLCTG----DLYRCSCH----LAGDLAEVNAITPVCMDTS*LKMNATNSMI------- 937
L G ++ + H LAGDLAE+NAI V DTS +K+NAT SMI
Sbjct: 343 -SLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKDTSGIKINATKSMIGHCLGAA 401
Query: 936 GVLSFWWFVS*AMTTGWMHRTINQDNLADDVTIDTVPDVKKQPEVNVGV 790
G L V A+TTGW+H TINQ N V DTV +VK+Q E+NV +
Sbjct: 402 GGLEAIATVK-AITTGWLHPTINQFNPEPAVDFDTVANVKQQHEINVAI 449
Score = 32.7 bits (73), Expect(2) = 8e-33
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3
Query: 724 LSAAFSNSFGFGGHNSAIS 668
++ A SNSFGFGGHNS ++
Sbjct: 445 INVAISNSFGFGGHNSVVA 463
>gb|AAC04691.1| beta-ketoacyl-ACP synthase I [Perilla frutescens]
Length = 474
Score = 125 bits (313), Expect(2) = 7e-31
Identities = 81/169 (47%), Positives = 105/169 (61%), Gaps = 15/169 (8%)
Frame = -1
Query: 1251 DGFVLDEGSGVLVMESVESATKREAQILARYLEGAITCDARHMTNPRSDGLKLGFLMKS* 1072
DGFV+ EGSGVLVMES+E A KR A I+A YL GA+ CDA HMT+PR+DGL + ++S
Sbjct: 289 DGFVMGEGSGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIQS- 347
Query: 1071 *ILLCTG----DLYRCSCH----LAGDLAEVNAITPVCMDTS*LKMNATNSMI------- 937
L +G ++ + H + GDLA+VNAI V +TS +K+NAT SMI
Sbjct: 348 -ALEDSGVSPEEVNYINAHATSTIVGDLADVNAIKKVFKNTSGIKINATKSMIGHCLGAA 406
Query: 936 GVLSFWWFVS*AMTTGWMHRTINQDNLADDVTIDTVPDVKKQPEVNVGV 790
G L V A+TTGW+H TINQ N + DTV + K+Q EVNV +
Sbjct: 407 GGLEAIASVK-AITTGWLHPTINQFNPEPSIGFDTVANEKQQHEVNVAI 454
Score = 32.3 bits (72), Expect(2) = 7e-31
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3
Query: 724 LSAAFSNSFGFGGHNSAIS 668
++ A SNSFGFGGHNS ++
Sbjct: 450 VNVAISNSFGFGGHNSVVA 468
>pir||T10061 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) precursor,
chloroplast - castor bean gi|294668|gb|AAA33873.1|
beta-ketoacyl-ACP synthase
Length = 469
Score = 125 bits (313), Expect(2) = 7e-31
Identities = 82/169 (48%), Positives = 104/169 (61%), Gaps = 15/169 (8%)
Frame = -1
Query: 1251 DGFVLDEGSGVLVMESVESATKREAQILARYLEGAITCDARHMTNPRSDGLKLGFLMKS* 1072
DGFV+ EG+GVLVMES+E A KR A I+A YL GA+ CDA HMT+PR+DGL + ++
Sbjct: 284 DGFVMGEGAGVLVMESLEHAMKRGAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCIER- 342
Query: 1071 *ILLCTG----DLYRCSCH----LAGDLAEVNAITPVCMDTS*LKMNATNSMI------- 937
L G ++ + H LAGDLAE+NAI V +TS +K+NAT SMI
Sbjct: 343 -SLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKNTSDIKINATKSMIGHCLGAA 401
Query: 936 GVLSFWWFVS*AMTTGWMHRTINQDNLADDVTIDTVPDVKKQPEVNVGV 790
G L V A+TTGW+H TINQ N V DTV + K+Q EVNV +
Sbjct: 402 GGLEAIACVK-AITTGWLHPTINQFNPEPSVEFDTVANKKQQHEVNVAI 449
Score = 32.3 bits (72), Expect(2) = 7e-31
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3
Query: 724 LSAAFSNSFGFGGHNSAIS 668
++ A SNSFGFGGHNS ++
Sbjct: 445 VNVAISNSFGFGGHNSVVA 463
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,118,826,417
Number of Sequences: 1393205
Number of extensions: 25526884
Number of successful extensions: 81039
Number of sequences better than 10.0: 325
Number of HSP's better than 10.0 without gapping: 74575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80446
length of database: 448,689,247
effective HSP length: 126
effective length of database: 273,145,417
effective search space used: 79212170930
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
