Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000135A_C01 KMC000135A_c01
(534 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD31397.1|AF118844_1 ethylene receptor homolog [Lycopersicon... 117 1e-25
emb|CAC48386.1| ethylene receptor [Fragaria x ananassa] 115 3e-25
dbj|BAA85819.1| ethylene receptor CS-ETR2 [Cucumis sativus] 114 7e-25
gb|AAD31396.1|AF118843_1 ethylene receptor homolog [Lycopersicon... 114 7e-25
gb|AAF20093.2| putative ethylene receptor [Nicotiana tabacum] 111 5e-24
>gb|AAD31397.1|AF118844_1 ethylene receptor homolog [Lycopersicon esculentum]
Length = 767
Score = 117 bits (292), Expect = 1e-25
Identities = 50/79 (63%), Positives = 70/79 (88%)
Frame = -2
Query: 521 SSFKVILLDLHMPDLDGFEVTTRIRKFRSRNWPMIVALTASAEEGLWERCKQAGINGVIR 342
++F+V++LDL MP++DG+EV R+RKFRSR+WP+I+ALTAS+EE +WE+C Q G+NG+IR
Sbjct: 683 TTFQVLILDLQMPEMDGYEVALRVRKFRSRSWPLIIALTASSEEQVWEKCLQVGMNGLIR 742
Query: 341 KPVLLQGIAGELRRILNAG 285
KPVLLQG+A EL+R+L G
Sbjct: 743 KPVLLQGLADELQRLLQRG 761
>emb|CAC48386.1| ethylene receptor [Fragaria x ananassa]
Length = 765
Score = 115 bits (289), Expect = 3e-25
Identities = 53/77 (68%), Positives = 65/77 (83%)
Frame = -2
Query: 524 GSSFKVILLDLHMPDLDGFEVTTRIRKFRSRNWPMIVALTASAEEGLWERCKQAGINGVI 345
G+S +V+ LDL M +LDG EV RIRKFRSR WP+I+A+TASA++ +W+RC Q GINGVI
Sbjct: 682 GASVQVVFLDLQMTELDGLEVAMRIRKFRSRTWPLIIAVTASADDDIWDRCMQIGINGVI 741
Query: 344 RKPVLLQGIAGELRRIL 294
RKPVLLQGIA ELRR+L
Sbjct: 742 RKPVLLQGIASELRRVL 758
>dbj|BAA85819.1| ethylene receptor CS-ETR2 [Cucumis sativus]
Length = 767
Score = 114 bits (285), Expect = 7e-25
Identities = 60/78 (76%), Positives = 68/78 (86%), Gaps = 1/78 (1%)
Frame = -2
Query: 524 GSSFKVILLDLHMPDLDGFEVTTRIRKFRSRNW-PMIVALTASAEEGLWERCKQAGINGV 348
GSS +V+LLDLHMP+LDGFEVTTRIRKFRS+N+ P+I+ALTASA E WERC Q G+NGV
Sbjct: 684 GSSIQVVLLDLHMPELDGFEVTTRIRKFRSQNYRPVIIALTASAGED-WERCVQIGMNGV 742
Query: 347 IRKPVLLQGIAGELRRIL 294
IRKPV LQGIA ELRR L
Sbjct: 743 IRKPVQLQGIAHELRRAL 760
>gb|AAD31396.1|AF118843_1 ethylene receptor homolog [Lycopersicon esculentum]
Length = 761
Score = 114 bits (285), Expect = 7e-25
Identities = 54/79 (68%), Positives = 66/79 (83%)
Frame = -2
Query: 521 SSFKVILLDLHMPDLDGFEVTTRIRKFRSRNWPMIVALTASAEEGLWERCKQAGINGVIR 342
SSF+++LLDLH+PDLDGFEVT RIRKF S NWP+IV LTA+A+E + RC Q G+NG+IR
Sbjct: 679 SSFQIVLLDLHLPDLDGFEVTMRIRKFGSHNWPLIVGLTATADENVTGRCLQIGMNGLIR 738
Query: 341 KPVLLQGIAGELRRILNAG 285
KPVLL GIA EL+R+L G
Sbjct: 739 KPVLLPGIADELQRVLLRG 757
>gb|AAF20093.2| putative ethylene receptor [Nicotiana tabacum]
Length = 760
Score = 111 bits (278), Expect = 5e-24
Identities = 48/76 (63%), Positives = 66/76 (86%)
Frame = -2
Query: 521 SSFKVILLDLHMPDLDGFEVTTRIRKFRSRNWPMIVALTASAEEGLWERCKQAGINGVIR 342
+S +V++LDLHMP++DGFEV R+RKF S WP+I+AL+A++EE +W+RC Q GING+IR
Sbjct: 678 TSIQVVILDLHMPEMDGFEVAIRVRKFHSHGWPLIIALSATSEELVWDRCLQVGINGLIR 737
Query: 341 KPVLLQGIAGELRRIL 294
KPVLLQG+A EL+R+L
Sbjct: 738 KPVLLQGMAEELQRVL 753
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 432,813,076
Number of Sequences: 1393205
Number of extensions: 8887587
Number of successful extensions: 25308
Number of sequences better than 10.0: 1821
Number of HSP's better than 10.0 without gapping: 24006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24918
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
