Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000101A_C04 KMC000101A_c04
(627 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC28107.1| nodule-enhanced sucrose synthase [Pisum sativum] 223 2e-57
emb|CAA09910.1| sucrose synthase [Pisum sativum] 223 2e-57
sp|P31926|SUSY_VICFA Sucrose synthase (Sucrose-UDP glucosyltrans... 222 4e-57
emb|CAB40795.1| sucrose synthase [Medicago truncatula] 220 1e-56
emb|CAB40794.1| sucrose synthase [Medicago truncatula] 220 1e-56
>gb|AAC28107.1| nodule-enhanced sucrose synthase [Pisum sativum]
Length = 806
Score = 223 bits (568), Expect = 2e-57
Identities = 106/110 (96%), Positives = 107/110 (96%)
Frame = -1
Query: 627 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPTHWDNISHGGLQRIEEKYTWQIY 448
PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVK DP+HWD IS GGLQRIEEKYTWQIY
Sbjct: 697 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKTDPSHWDKISQGGLQRIEEKYTWQIY 756
Query: 447 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 298
SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE
Sbjct: 757 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806
>emb|CAA09910.1| sucrose synthase [Pisum sativum]
Length = 806
Score = 223 bits (568), Expect = 2e-57
Identities = 106/110 (96%), Positives = 107/110 (96%)
Frame = -1
Query: 627 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPTHWDNISHGGLQRIEEKYTWQIY 448
PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVK DP+HWD IS GGLQRIEEKYTWQIY
Sbjct: 697 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKTDPSHWDKISQGGLQRIEEKYTWQIY 756
Query: 447 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 298
SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE
Sbjct: 757 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806
>sp|P31926|SUSY_VICFA Sucrose synthase (Sucrose-UDP glucosyltransferase)
gi|322721|pir||S31479 sucrose synthase (EC 2.4.1.13) -
fava bean gi|22038|emb|CAA49428.1| sucrose synthase
[Vicia faba] gi|295426|gb|AAC37346.1|
UDP-glucose:D-fructose-2-glucosyltransferase
Length = 806
Score = 222 bits (565), Expect = 4e-57
Identities = 106/110 (96%), Positives = 107/110 (96%)
Frame = -1
Query: 627 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPTHWDNISHGGLQRIEEKYTWQIY 448
PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVK DP+HWD IS GGLQRIEEKYTWQIY
Sbjct: 697 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIY 756
Query: 447 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 298
SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE
Sbjct: 757 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806
>emb|CAB40795.1| sucrose synthase [Medicago truncatula]
Length = 805
Score = 220 bits (561), Expect = 1e-56
Identities = 105/109 (96%), Positives = 106/109 (96%)
Frame = -1
Query: 627 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPTHWDNISHGGLQRIEEKYTWQIY 448
PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDP+HWD IS GGLQRIEEKYTW IY
Sbjct: 697 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQGGLQRIEEKYTWTIY 756
Query: 447 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 301
SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct: 757 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805
>emb|CAB40794.1| sucrose synthase [Medicago truncatula]
Length = 805
Score = 220 bits (561), Expect = 1e-56
Identities = 105/109 (96%), Positives = 106/109 (96%)
Frame = -1
Query: 627 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPTHWDNISHGGLQRIEEKYTWQIY 448
PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDP+HWD IS GGLQRIEEKYTW IY
Sbjct: 697 PAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQGGLQRIEEKYTWTIY 756
Query: 447 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 301
SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct: 757 SQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 501,883,919
Number of Sequences: 1393205
Number of extensions: 10252854
Number of successful extensions: 34932
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 33751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34881
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)