Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000100A_C01 KMC000100A_c01
(767 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201491.1| disease resistance protein (CC-NBS-LRR class), ... 117 2e-25
ref|NP_201492.1| disease resistance protein (CC-NBS-LRR class), ... 107 2e-22
ref|NP_201490.1| disease resistance protein (NBS-LRR class), put... 103 2e-21
ref|NP_195056.1| disease resistance protein (CC-NBS-LRR class), ... 101 1e-20
ref|NP_199539.1| disease resistance protein (NBS-LRR class), put... 92 6e-18
>ref|NP_201491.1| disease resistance protein (CC-NBS-LRR class), putative; protein id:
At5g66900.1 [Arabidopsis thaliana]
gi|9758140|dbj|BAB08632.1| disease resistance
protein-like [Arabidopsis thaliana]
Length = 809
Score = 117 bits (292), Expect = 2e-25
Identities = 57/116 (49%), Positives = 77/116 (66%)
Frame = -1
Query: 767 QEIGKLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSL 588
+ IG L LE+LRL S +L LP++ LS LR LDIS+C+ L LP+EIG L NLK +
Sbjct: 691 EAIGNLSRLEVLRLCSSMNLSELPEATEGLSNLRFLDISHCLGLRKLPQEIGKLQNLKKI 750
Query: 587 YMTSCAGCELPSSIVNLQNLTVVCDEETAASWEAFEYVIPNLKIEVPQVDVNLNWL 420
M C+GCELP S+ NL+NL V CDEET WE + + NL+++ +++ NLN L
Sbjct: 751 SMRKCSGCELPESVTNLENLEVKCDEETGLLWERLKPKMRNLRVQEEEIEHNLNLL 806
>ref|NP_201492.1| disease resistance protein (CC-NBS-LRR class), putative; protein id:
At5g66910.1, supported by cDNA: gi_18087525 [Arabidopsis
thaliana] gi|9758141|dbj|BAB08633.1| disease resistance
protein-like [Arabidopsis thaliana]
gi|18087526|gb|AAL58897.1|AF462802_1 AT5g66910/MUD21_17
[Arabidopsis thaliana]
Length = 815
Score = 107 bits (266), Expect = 2e-22
Identities = 53/116 (45%), Positives = 73/116 (62%)
Frame = -1
Query: 767 QEIGKLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSL 588
+ IG L LE+LR+ SC +L LP++ RLS LR LDIS+C+ L LP+EIG L L+++
Sbjct: 697 EAIGNLSRLEVLRMCSCMNLSELPEATERLSNLRSLDISHCLGLRKLPQEIGKLQKLENI 756
Query: 587 YMTSCAGCELPSSIVNLQNLTVVCDEETAASWEAFEYVIPNLKIEVPQVDVNLNWL 420
M C+GCELP S+ L+NL V CDE T WE + NL++ + + NL L
Sbjct: 757 SMRKCSGCELPDSVRYLENLEVKCDEVTGLLWERLMPEMRNLRVHTEETEHNLKLL 812
>ref|NP_201490.1| disease resistance protein (NBS-LRR class), putative; protein id:
At5g66890.1 [Arabidopsis thaliana]
gi|9758139|dbj|BAB08631.1| contains similarity to
disease resistance protein~gene_id:MUD21.15 [Arabidopsis
thaliana]
Length = 415
Score = 103 bits (258), Expect = 2e-21
Identities = 55/116 (47%), Positives = 71/116 (60%)
Frame = -1
Query: 767 QEIGKLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSL 588
+ IG L +LE LRLSSC L LP++I RL LR LD+S L +LP EIG L L+ +
Sbjct: 297 EAIGDLRDLETLRLSSCASLLELPETIDRLDNLRFLDVSGGFQLKNLPLEIGKLKKLEKI 356
Query: 587 YMTSCAGCELPSSIVNLQNLTVVCDEETAASWEAFEYVIPNLKIEVPQVDVNLNWL 420
M C CELP S+ NL+NL V CDE+TA W+ + + NL I + + NLN L
Sbjct: 357 SMKDCYRCELPDSVKNLENLEVKCDEDTAFLWKILKPEMKNLTITEEKTEHNLNLL 412
>ref|NP_195056.1| disease resistance protein (CC-NBS-LRR class), putative; protein id:
At4g33300.1 [Arabidopsis thaliana] gi|7485661|pir||T05981
hypothetical protein F17M5.60 - Arabidopsis thaliana
gi|4490297|emb|CAB38788.1| putative protein [Arabidopsis
thaliana] gi|7270278|emb|CAB80047.1| putative protein
[Arabidopsis thaliana]
Length = 855
Score = 101 bits (251), Expect = 1e-20
Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Frame = -1
Query: 767 QEIGKLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSL 588
+ + KL+ LE+LRL +C +LK LP I L L+ LDIS C+SL LPEEIG L L+ +
Sbjct: 737 KNLSKLQALEILRLYACPELKTLPGEICELPGLKYLDISQCVSLSCLPEEIGKLKKLEKI 796
Query: 587 YMTSCAGCELPSSIVNLQNLT-VVCDEETAASWEAFEYVIPNLKIEVPQVDVNLNWL 420
M C + PSS V+L++L V+CD + A WE E +P LKIE + +L+WL
Sbjct: 797 DMRECCFSDRPSSAVSLKSLRHVICDTDVAFMWEEVEKAVPGLKIEAAEKCFSLDWL 853
Score = 35.4 bits (80), Expect = 0.90
Identities = 33/101 (32%), Positives = 47/101 (45%), Gaps = 5/101 (4%)
Frame = -1
Query: 746 NLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSLYMTSCAG 567
+L L +++ D GL D KL L I +C L +LP I L +L L +T+C
Sbjct: 673 SLILCKINKSFDQTGL-DVADIFPKLGDLTIDHCDDLVALPSSICGLTSLSCLSITNCPR 731
Query: 566 C-ELPSSIVNLQNLTVV----CDEETAASWEAFEYVIPNLK 459
ELP ++ LQ L ++ C E E E +P LK
Sbjct: 732 LGELPKNLSKLQALEILRLYACPELKTLPGEICE--LPGLK 770
>ref|NP_199539.1| disease resistance protein (NBS-LRR class), putative; protein id:
At5g47280.1 [Arabidopsis thaliana]
gi|8809611|dbj|BAA97162.1| disease resistance
protein-like [Arabidopsis thaliana]
Length = 623
Score = 92.4 bits (228), Expect = 6e-18
Identities = 49/116 (42%), Positives = 71/116 (60%), Gaps = 1/116 (0%)
Frame = -1
Query: 767 QEIGKLENLELLRLSSCTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSL 588
+ I KL+ L+LLRL +C +LK LP I L +L +DIS+C+SL SLPE+IGN+ L+ +
Sbjct: 505 KNISKLQALQLLRLYACPELKSLPVEICELPRLVYVDISHCLSLSSLPEKIGNVRTLEKI 564
Query: 587 YMTSCAGCELPSSIVNLQNLT-VVCDEETAASWEAFEYVIPNLKIEVPQVDVNLNW 423
M C+ +PSS V+L +L V C E W+ E +P L+IE + N+ W
Sbjct: 565 DMRECSLSSIPSSAVSLTSLCYVTCYREALWMWKEVEKAVPGLRIEATEKWFNMTW 620
Score = 35.0 bits (79), Expect = 1.2
Identities = 19/55 (34%), Positives = 32/55 (57%)
Frame = +1
Query: 601 LHRLPISSGKLGRLMQXDMSRSLSFESLPIESGNPFKSVQELSLRSSKFSNFPIS 765
L LP+ +L RL+ D+S LS SLP + GN ++++++ +R S+ P S
Sbjct: 524 LKSLPVEICELPRLVYVDISHCLSLSSLPEKIGN-VRTLEKIDMRECSLSSIPSS 577
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 598,860,780
Number of Sequences: 1393205
Number of extensions: 12165559
Number of successful extensions: 45522
Number of sequences better than 10.0: 1132
Number of HSP's better than 10.0 without gapping: 38905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44484
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37534933228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
