Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000099A_C02 KMC000099A_c02
(575 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK82969.1|AF276228_1 putative heme oxygenase 1 precursor [Pi... 241 6e-63
gb|AAK63009.1|AF320025_1 heme oxygenase 3 [Glycine max] 233 2e-60
gb|AAK63008.1|AF320024_1 heme oxygenase 1 [Glycine max] 228 4e-59
gb|AAK52998.1|AF375414_1 At2g26670/F18A8.4 [Arabidopsis thaliana... 224 6e-58
ref|NP_180235.1| heme oxygenase 1 (HO1); protein id: At2g26670.1... 224 6e-58
>gb|AAK82969.1|AF276228_1 putative heme oxygenase 1 precursor [Pisum sativum]
gi|15076865|gb|AAK82970.1|AF276229_1 putative heme
oxygenase 1 precursor [Pisum sativum]
gi|15076867|gb|AAK82971.1|AF276230_1 putative heme
oxygenase 1 precursor [Pisum sativum]
Length = 283
Score = 241 bits (614), Expect = 6e-63
Identities = 113/125 (90%), Positives = 119/125 (94%)
Frame = -2
Query: 574 KDLEWFKEQGYTIPQPSSPGLNYAQYLRDLSQNDPQAFICHFYNIYFAHSAGGRMIGKKI 395
KDLEWFKEQGYTIP+PSSPGL YA YL DLSQNDPQAFICHFYNIYFAHSAGGRMIGKKI
Sbjct: 159 KDLEWFKEQGYTIPEPSSPGLTYAVYLTDLSQNDPQAFICHFYNIYFAHSAGGRMIGKKI 218
Query: 394 AGELLNNKGLEFYKWDGDLSQLLQNVRDKLNKVAEQWTREEKNHCLEETEKSFKWSGEIL 215
A +LLNN+ LEFYKWDGDLSQ+LQNVRDKLNKVAE+W+REEKNHCLEETEKSFK SGEIL
Sbjct: 219 ASQLLNNQALEFYKWDGDLSQMLQNVRDKLNKVAEEWSREEKNHCLEETEKSFKLSGEIL 278
Query: 214 RLILS 200
RLILS
Sbjct: 279 RLILS 283
>gb|AAK63009.1|AF320025_1 heme oxygenase 3 [Glycine max]
Length = 249
Score = 233 bits (593), Expect = 2e-60
Identities = 109/125 (87%), Positives = 117/125 (93%)
Frame = -2
Query: 574 KDLEWFKEQGYTIPQPSSPGLNYAQYLRDLSQNDPQAFICHFYNIYFAHSAGGRMIGKKI 395
+DL+WFKEQGYTIP+PSSPGL YAQYL++LS DPQAFICHFYNIYFAHSAGGRMIGKK+
Sbjct: 125 EDLDWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSAGGRMIGKKV 184
Query: 394 AGELLNNKGLEFYKWDGDLSQLLQNVRDKLNKVAEQWTREEKNHCLEETEKSFKWSGEIL 215
A +LLNNK LEFYKWDGDL QLLQNVRDKLNKVAE WTREEK+HCLEETEKSFK SGEIL
Sbjct: 185 AEKLLNNKALEFYKWDGDLPQLLQNVRDKLNKVAEPWTREEKDHCLEETEKSFKLSGEIL 244
Query: 214 RLILS 200
RLILS
Sbjct: 245 RLILS 249
>gb|AAK63008.1|AF320024_1 heme oxygenase 1 [Glycine max]
Length = 250
Score = 228 bits (581), Expect = 4e-59
Identities = 107/125 (85%), Positives = 116/125 (92%)
Frame = -2
Query: 574 KDLEWFKEQGYTIPQPSSPGLNYAQYLRDLSQNDPQAFICHFYNIYFAHSAGGRMIGKKI 395
+DLEWFKEQGYTIP+PSSPGL YAQYL++LS DPQAFICHFYNIYFAHSAGGRMIGKK+
Sbjct: 126 EDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSAGGRMIGKKV 185
Query: 394 AGELLNNKGLEFYKWDGDLSQLLQNVRDKLNKVAEQWTREEKNHCLEETEKSFKWSGEIL 215
A +LLNNK LEFYKWD DL +LLQNVRDKLNKVAE W+REEK+HCLEETEKSFK SGEIL
Sbjct: 186 AEKLLNNKALEFYKWDDDLPRLLQNVRDKLNKVAEPWSREEKDHCLEETEKSFKLSGEIL 245
Query: 214 RLILS 200
RLILS
Sbjct: 246 RLILS 250
>gb|AAK52998.1|AF375414_1 At2g26670/F18A8.4 [Arabidopsis thaliana] gi|22136554|gb|AAM91063.1|
At2g26670/F18A8.4 [Arabidopsis thaliana]
Length = 240
Score = 224 bits (571), Expect = 6e-58
Identities = 101/124 (81%), Positives = 117/124 (93%)
Frame = -2
Query: 571 DLEWFKEQGYTIPQPSSPGLNYAQYLRDLSQNDPQAFICHFYNIYFAHSAGGRMIGKKIA 392
DLEWFKEQGY IP+P++PG Y+QYL++L++ DPQAFICHFYNIYFAHSAGGRMIG+K+A
Sbjct: 117 DLEWFKEQGYEIPEPTAPGKTYSQYLKELAEKDPQAFICHFYNIYFAHSAGGRMIGRKVA 176
Query: 391 GELLNNKGLEFYKWDGDLSQLLQNVRDKLNKVAEQWTREEKNHCLEETEKSFKWSGEILR 212
+L+NK LEFYKWDG+LSQLLQNVR+KLNKVAE+WTREEKNHCLEETEKSFK+SGEILR
Sbjct: 177 ERILDNKELEFYKWDGELSQLLQNVREKLNKVAEEWTREEKNHCLEETEKSFKYSGEILR 236
Query: 211 LILS 200
LILS
Sbjct: 237 LILS 240
>ref|NP_180235.1| heme oxygenase 1 (HO1); protein id: At2g26670.1, supported by cDNA:
33692., supported by cDNA: gi_4877396 [Arabidopsis
thaliana] gi|25370567|pir||T52457 heme oxygenase
(decyclizing) (EC 1.14.99.3) precursor, chloroplast
[validated] - Arabidopsis thaliana
gi|4530591|gb|AAD22107.1| heme oxygenase 1 [Arabidopsis
thaliana] gi|4530593|gb|AAD22108.1| heme oxygenase 1
[Arabidopsis thaliana] gi|4877362|dbj|BAA77758.1|
plastid heme oxygenase [Arabidopsis thaliana]
gi|4877397|dbj|BAA77759.1| plastid heme oxygenase
[Arabidopsis thaliana] gi|4883666|gb|AAB95301.2| heme
oxygenase 1 (HO1) [Arabidopsis thaliana]
gi|21592891|gb|AAM64841.1| heme oxygenase 1 (HO1)
[Arabidopsis thaliana] gi|26983816|gb|AAN86160.1|
putative heme oxygenase HO1 [Arabidopsis thaliana]
Length = 282
Score = 224 bits (571), Expect = 6e-58
Identities = 101/124 (81%), Positives = 117/124 (93%)
Frame = -2
Query: 571 DLEWFKEQGYTIPQPSSPGLNYAQYLRDLSQNDPQAFICHFYNIYFAHSAGGRMIGKKIA 392
DLEWFKEQGY IP+P++PG Y+QYL++L++ DPQAFICHFYNIYFAHSAGGRMIG+K+A
Sbjct: 159 DLEWFKEQGYEIPEPTAPGKTYSQYLKELAEKDPQAFICHFYNIYFAHSAGGRMIGRKVA 218
Query: 391 GELLNNKGLEFYKWDGDLSQLLQNVRDKLNKVAEQWTREEKNHCLEETEKSFKWSGEILR 212
+L+NK LEFYKWDG+LSQLLQNVR+KLNKVAE+WTREEKNHCLEETEKSFK+SGEILR
Sbjct: 219 ERILDNKELEFYKWDGELSQLLQNVREKLNKVAEEWTREEKNHCLEETEKSFKYSGEILR 278
Query: 211 LILS 200
LILS
Sbjct: 279 LILS 282
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 487,853,722
Number of Sequences: 1393205
Number of extensions: 10660777
Number of successful extensions: 30364
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 29322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30335
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
